Protein Alignment SkpA and skr-13

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_503042.1
• Gene: skr-13 / 178493
• WormBaseID: WBGene00004819
• Length: 172
• Species: Caenorhabditis elegans
• Alignment Length: 153
• Identity: 60/153 - (39%)
• Similarity: 85/153 - (55%)
• Gaps: 5/153 - (3%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCG--MEDDENA-IVPLPNVNSTILRKVLTWAHYHKD 66
            |:.|||..:.....:..:.|.|:..::|:.|  :|:.|.. .:|:.|||...:.||......||.
 Worm    16 KIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAELCEKHKA 80

  Fly    67 DPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTP 131
            |..|  :|.....:|..|..||..|||::...||:||||:|:||||||:...||||:||.||||.
 Worm    81 DAIP--EDNMNVLKTLTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTT 143

  Fly   132 EEIRKTFNIKKDFSPAEEEQVRK 154
            .|:|:.|.|..|...|.||..:|
 Worm   144 AELREIFGINTDEQDAAEETAQK 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	46/123 (37%)
		Skp1	112..159	CDD:460222	22/43 (51%)
skr-13	NP_503042.1	BTB_POZ_SKP1	14..138	CDD:349631	46/123 (37%)
		Skp1	124..169	CDD:460222	22/43 (51%)