Protein Alignment SkpA and skr-10

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_502902.1
• Gene: skr-10 / 178447
• WormBaseID: WBGene00004816
• Length: 192
• Species: Caenorhabditis elegans
• Alignment Length: 159
• Identity: 58/159 - (36%)
• Similarity: 87/159 - (54%)
• Gaps: 3/159 - (1%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENA-IVPLPNVNSTILRKVLTWAHYHKDDP 68
            |::|:|..:|:...:..|.|.|:..::..|..||..:. .:|:.||...||:.|:.|...||.:.
 Worm    22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHKGEA 86

  Fly    69 QPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTPEE 133
            .|.:||...:..|  :..||.:|||:|...||:||:|.||||:.||:...||.||.|..||:|:|
 Worm    87 LPVDDDSVPKHIT--VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMMAIGKSPDE 149

  Fly   134 IRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
            :|..|.|..|......|:..||....|:|
 Worm   150 LRIIFAIPTDEEDEAAERAAKEKAEAEKK 178

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	44/121 (36%)
		Skp1	112..159	CDD:396171	18/46 (39%)
skr-10	NP_502902.1	Skp1	18..127	CDD:214704	37/106 (35%)
		Skp1	101..>159	CDD:279768	29/57 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160697
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.860