Protein Alignment SkpA and skr-17

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_001379551.1
• Gene: skr-17 / 174257
• WormBaseID: WBGene00004823
• Length: 180
• Species: Caenorhabditis elegans
• Alignment Length: 141
• Identity: 52/141 - (36%)
• Similarity: 76/141 - (53%)
• Gaps: 5/141 - (3%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDD---ENAIVPLPNVNSTILRKVLTWAHYHK 65
            ::|.|||..:...||:....|.|:...:.:.|.:.:   |...||:.||....|:.::.|...||
 Worm    25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEWCDKHK 89

  Fly    66 DDPQPTEDDESKEKRTDDIISWDADFL-KVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGK 129
            :| .|......|:|:...|.|||..|| ::....||:||.||.:||:.||:...||||||..|||
 Worm    90 ED-DPAIALAEKDKKNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGCKTVANSAKGK 153

  Fly   130 TPEEIRKTFNI 140
            ..||:|:.|.|
 Worm   154 NAEEMRELFGI 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	44/125 (35%)
		Skp1	112..159	CDD:396171	16/29 (55%)
skr-17	NP_001379551.1	BTB_POZ_SKP1	24..150	CDD:349631	44/125 (35%)
		Skp1	137..>166	CDD:396171	16/28 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160704
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850