Protein Alignment SkpA and skr-15

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_494662.1
• Gene: skr-15 / 173729
• WormBaseID: WBGene00004821
• Length: 184
• Species: Caenorhabditis elegans
• Alignment Length: 153
• Identity: 46/153 - (30%)
• Similarity: 78/153 - (50%)
• Gaps: 7/153 - (4%)

  Fly     6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGME-DDENAIVPLP--NVNSTILRKVLTWAHYHKDD 67
            ::|:|..:.....|..|.|.|:...:.:.|.. ::..::||:|  .||...|:.|:.|..:||.|
 Worm    23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCEHHKAD 87

  Fly    68 PQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTPE 132
            |.|    |:.......:..||..|:.::...|.:|:.|:|:|::..||...||.:|.:.||.:||
 Worm    88 PVP----EAYPSGNTVLPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIAGLAKGMSPE 148

  Fly   133 EIRKTFNIKKDFSPAEEEQVRKE 155
            |:|..|.|..|....:.|:..||
 Worm   149 EMRVFFCIPTDEEDEKAERFGKE 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	34/122 (28%)
		Skp1	112..159	CDD:396171	17/44 (39%)
skr-15	NP_494662.1	Skp1	20..127	CDD:214704	29/107 (27%)
		SKP1	23..176	CDD:227528	46/153 (30%)
		Skp1	101..167	CDD:279768	22/65 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160705
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.860