Protein Alignment SkpA and skr-1

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_492513.1
• Gene: skr-1 / 172775
• WormBaseID: WBGene00004807
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 161
• Identity: 104/161 - (64%)
• Similarity: 131/161 - (81%)
• Gaps: 3/161 - (1%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDE--NA-IVPLPNVNSTILRKVLTWAHYHK 65
            ||:.|||.|||.....:.:.|.||.|:|.|.|::|:|  || .:|:.||.::||:||::|.::|.
 Worm    16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHHH 80

  Fly    66 DDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKT 130
            .||..|||.:::|||||||.|||.:|||||||||||||||||||||||||::||||||||||||:
 Worm    81 SDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKS 145

  Fly   131 PEEIRKTFNIKKDFSPAEEEQVRKENEWCEE 161
            |||||:|||||.||:|.||||:||||.|||:
 Worm   146 PEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	75/124 (60%)
		Skp1	112..159	CDD:460222	37/46 (80%)
skr-1	NP_492513.1	BTB_POZ_SKP1	16..141	CDD:349631	75/124 (60%)
		Skp1	127..174	CDD:460222	37/46 (80%)