Protein Alignment SkpA and C42D4.18

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_001255289.1
• Gene: C42D4.18 / 13196550
• WormBaseID: WBGene00206380
• Length: 168
• Species: Caenorhabditis elegans
• Alignment Length: 55
• Identity: 15/55 - (27%)
• Similarity: 25/55 - (45%)
• Gaps: 6/55 - (10%)

  Fly   110 DIKGLLELTCKTVANMIKG--KTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
            |:|.|.|    :...|.|.  .:|:|:.:...|::.......|.:||..|..:||
 Worm    11 DLKALTE----SRKQMEKAGLLSPQELSRKICIEEQMKFEIAECLRKAQEKADEK 61

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	4/15 (27%)
		Skp1	112..159	CDD:396171	12/48 (25%)
C42D4.18	NP_001255289.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900