DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt4-20 and set-4

DIOPT Version :9

Sequence 1:NP_001245453.1 Gene:Hmt4-20 / 31015 FlyBaseID:FBgn0025639 Length:1300 Species:Drosophila melanogaster
Sequence 2:NP_495272.1 Gene:set-4 / 174045 WormBaseID:WBGene00016313 Length:288 Species:Caenorhabditis elegans


Alignment Length:244 Identity:109/244 - (44%)
Similarity:153/244 - (62%) Gaps:8/244 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 MSPRELSENDDLATSLILDPHLGFQTHKMNIRFRPLKVDT-QQLKAIVDDFIHTQNYDIAIQRIY 215
            |:|.||...||.||:|::|..|.|.||||:.:.|.|..|. :..:.::..|...:::..||..:.
 Worm    24 MTPTELCYFDDFATTLVVDSVLNFTTHKMSKKRRYLYQDEYRTARTVMKTFREQRDWTNAIYGLL 88

  Fly   216 EGPWIPRHLKNKNKIATKRL---HDHIVRYLRVFDKDSGFAIEACYRYTLEEQRGAKISSTKRWS 277
            ....:...|   :|:...:|   .|||||:|.:|..|||:.|:.|.||:.|..:|||:.||..||
 Worm    89 TLRSVSHFL---SKLPPNKLFEFRDHIVRFLNMFILDSGYTIQECKRYSQEGHQGAKLVSTGVWS 150

  Fly   278 KNDKIECLVGCIAELTEAEEAALLHSGKNDFSVMYSCRKNCAQLWLGPAAYINHDCRANCKFLAT 342
            :.||||.|.|.:..|:..:|.::|....:|||||||.||.|:.|||||.||||||||..|:|::.
 Worm   151 RGDKIERLSGVVCLLSSEDEDSILAQEGSDFSVMYSTRKRCSTLWLGPGAYINHDCRPTCEFVSH 215

  Fly   343 GRDTACVKVLRDIEVGEEITCFYGEDFFGDSNRYCECETCERRGTGAFA 391
            | .||.::||||:..|:|||||||.:|||.:|..|||.|||:...|||:
 Worm   216 G-STAHIRVLRDMVPGDEITCFYGSEFFGPNNIDCECCTCEKNMNGAFS 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt4-20NP_001245453.1 SET 256..372 CDD:214614 62/115 (54%)
set-4NP_495272.1 SET 129..244 CDD:214614 62/115 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167186
Domainoid 1 1.000 74 1.000 Domainoid score I5963
eggNOG 1 0.900 - - E1_COG1437
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5024
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002279
OrthoInspector 1 1.000 - - oto20026
orthoMCL 1 0.900 - - OOG6_104297
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1322
SonicParanoid 1 1.000 - - X2124
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.580

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