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Protein Alignment Roc1a and lmgA
DIOPT Version :9
Sequence 1: | NP_001138143.2 |
Gene: | Roc1a / 31014 |
FlyBaseID: | FBgn0025638 |
Length: | 136 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001097122.1 |
Gene: | lmgA / 5740853 |
FlyBaseID: | FBgn0250903 |
Length: | 85 |
Species: | Drosophila melanogaster |
Alignment Length: | 82 |
Identity: | 31/82 - (37%) |
Similarity: | 42/82 - (51%) |
Gaps: | 8/82 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 KQWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 117
|.|..||.|.|....:||.|||......|.|| :...::|.:.||||:|.||.|||.:||.
Fly 6 KSWTGVATWRWIANDENCGICRMSFESTCPEC-----ALPGDDCPLVWGVCSHCFHMHCIVKWLN 65
Fly 118 TRQV---CPLDNREWDF 131
.:.: ||:..:.|.|
Fly 66 LQPLNKQCPMCRQSWKF 82
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45463170 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5194 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11210 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.840 |
|
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