Protein Alignment Roc1a and lmgA

DIOPT Version :10

• Sequence 1: NP_001138143.2
• Gene: Roc1a / 31014
• FlyBaseID: FBgn0025638
• Length: 136
• Species: Drosophila melanogaster
• Sequence 2: NP_001097122.1
• Gene: lmgA / 5740853
• FlyBaseID: FBgn0250903
• Length: 85
• Species: Drosophila melanogaster
• Alignment Length: 82
• Identity: 31/82 - (37%)
• Similarity: 42/82 - (51%)
• Gaps: 8/82 - (9%)

  Fly    53 KQWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 117
            |.|..||.|.|....:||.|||......|.||     :...::|.:.||||:|.||.|||.:||.
  Fly     6 KSWTGVATWRWIANDENCGICRMSFESTCPEC-----ALPGDDCPLVWGVCSHCFHMHCIVKWLN 65

  Fly   118 TRQV---CPLDNREWDF 131
            .:.:   ||:..:.|.|
  Fly    66 LQPLNKQCPMCRQSWKF 82

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Roc1a	NP_001138143.2	mRING-H2-C3H2C2D_RBX1	68..129	CDD:438148	23/63 (37%)
lmgA	NP_001097122.1	RING_Ubox	1..82	CDD:473075	30/80 (38%)