DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc1a and Rbx1

DIOPT Version :10

Sequence 1:NP_001138143.2 Gene:Roc1a / 31014 FlyBaseID:FBgn0025638 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_062686.1 Gene:Rbx1 / 56438 MGIID:1891829 Length:108 Species:Mus musculus


Alignment Length:137 Identity:95/137 - (69%)
Similarity:99/137 - (72%) Gaps:34/137 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEVDEDGYEVPSSSSKG-DKKRFEVKKVSGQQKSRVIVNECTDGNTSSFPLRRKQWNAVALWAWD 64
            |:||     .||.::.| .||||||||                            ||||||||||
Mouse     5 MDVD-----TPSGTNSGAGKKRFEVKK----------------------------WNAVALWAWD 36

  Fly    65 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 129
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    37 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 101

  Fly   130 DFQKYGH 136
            :||||||
Mouse   102 EFQKYGH 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc1aNP_001138143.2 mRING-H2-C3H2C2D_RBX1 68..129 CDD:438148 60/60 (100%)
Rbx1NP_062686.1 mRING-H2-C3H2C2D_RBX1 40..101 CDD:438148 60/60 (100%)

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