Protein Alignment Roc1a and lmgB

DIOPT Version :9

• Sequence 1: NP_001138143.2
• Gene: Roc1a / 31014
• FlyBaseID: FBgn0025638
• Length: 136
• Species: Drosophila melanogaster
• Sequence 2: NP_001097124.1
• Gene: lmgB / 44128
• FlyBaseID: FBgn0085470
• Length: 365
• Species: Drosophila melanogaster
• Alignment Length: 52
• Identity: 13/52 - (25%)
• Similarity: 19/52 - (36%)
• Gaps: 14/52 - (26%)

  Fly    12 SSSSKGDKKRFEVKKVSGQQKSRVIVNECTDGNTSSFPLRRKQWNAVA-LWA 62
            ||||.|             ..|..|.|:........:.||:...:.:: |||
  Fly   117 SSSSTG-------------ATSSTIDNQLAILRREMYGLRQLDLSLLSQLWA 155

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Roc1a	NP_001138143.2	APC11	53..136	CDD:227521	3/11 (27%)
		zf-rbx1	53..126	CDD:289448	3/11 (27%)
lmgB	NP_001097124.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5194
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900