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Protein Alignment Roc1a and Rnf7
DIOPT Version :9
Sequence 1: | NP_001138143.2 |
Gene: | Roc1a / 31014 |
FlyBaseID: | FBgn0025638 |
Length: | 136 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100318.1 |
Gene: | Rnf7 / 300948 |
RGDID: | 1311048 |
Length: | 113 |
Species: | Rattus norvegicus |
Alignment Length: | 131 |
Identity: | 53/131 - (40%) |
Similarity: | 67/131 - (51%) |
Gaps: | 23/131 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 EDGYEVPSSSSKGDKKRFEVKKVSGQQKSRVIVNECTDGNTSSFPLRRKQWNAVALWAWDIVVDN 69
|||.|....||. ||...|: .|....|.| |:|||||:|:||:..|.
Rat 5 EDGEEPCVLSSH-----------SGSAGSK-------SGGDKMFSL--KKWNAVAMWSWDVECDT 49
Fly 70 CAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWDFQKY 134
|||||..:||.|:.|||.. ..|:|.|.||.|||:||..|:|.|:|....|||..::|..|:.
Rat 50 CAICRVQVMDACLRCQAEN---KQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRI 111
Fly 135 G 135
|
Rat 112 G 112
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5194 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG54028 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1587140at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.830 |
|
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