Protein Alignment Roc1a and rbx-2

DIOPT Version :9

• Sequence 1: NP_001138143.2
• Gene: Roc1a / 31014
• FlyBaseID: FBgn0025638
• Length: 136
• Species: Drosophila melanogaster
• Sequence 2: NP_491849.1
• Gene: rbx-2 / 172344
• WormBaseID: WBGene00019993
• Length: 112
• Species: Caenorhabditis elegans
• Alignment Length: 118
• Identity: 46/118 - (38%)
• Similarity: 66/118 - (55%)
• Gaps: 14/118 - (11%)

  Fly    12 SSSSKGDKKRFEVKKVSGQQKSRVIVNECTDGNTSSFPLRRKQWNAVALWAWDIVVDNCAICRNH 76
            ::||..|          .|:.|.....:.|...:.|.|...|:|||:|:||||:..|.|||||.|
 Worm     2 NNSSNAD----------SQEGSTSAQKQKTANPSESRPFVLKKWNALAVWAWDVECDTCAICRVH 56

  Fly    77 IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 129
            :|:.|:.||    |..|.||.|.||.|||:||..|:::|::....|||..::|
 Worm    57 LMEECLRCQ----SEPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCPLCQKDW 105

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Roc1a	NP_001138143.2	APC11	53..136	CDD:227521	38/77 (49%)
		zf-rbx1	53..126	CDD:289448	37/72 (51%)
rbx-2	NP_491849.1	RING-H2_RBX2	47..105	CDD:319380	28/61 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5194
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S381
OMA	1	1.010	-	-		QHG54028
OrthoDB	1	1.010	-	-		D1587140at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1071
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.810