DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc1a and Roc2

DIOPT Version :10

Sequence 1:NP_001138143.2 Gene:Roc1a / 31014 FlyBaseID:FBgn0025638 Length:136 Species:Drosophila melanogaster
Sequence 2:XP_315566.3 Gene:Roc2 / 1276246 VectorBaseID:AGAMI1_000256 Length:109 Species:Anopheles gambiae


Alignment Length:85 Identity:42/85 - (49%)
Similarity:55/85 - (64%) Gaps:2/85 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 KQWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASAT--SEECTVAWGVCNHAFHFHCISRW 115
            |:|||||:|:||:..|.|||||..:||.|:.|||.....|  .::|.|.||.|||:||..|:|.|
Mosquito    24 KKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAESKKDTLGRQDCVVVWGECNHSFHHCCMSLW 88

  Fly   116 LKTRQVCPLDNREWDFQKYG 135
            :|....|||..:||..|:.|
Mosquito    89 IKQNNRCPLCQQEWSIQRMG 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc1aNP_001138143.2 mRING-H2-C3H2C2D_RBX1 68..129 CDD:438148 29/62 (47%)
Roc2XP_315566.3 RING-H2_RBX2 38..102 CDD:438129 29/63 (46%)

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