DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13367 and Gatad1

DIOPT Version :9

Sequence 1:NP_569851.2 Gene:CG13367 / 31013 FlyBaseID:FBgn0025634 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_575359.3 Gene:Gatad1 / 500005 RGDID:1562004 Length:264 Species:Rattus norvegicus


Alignment Length:270 Identity:104/270 - (38%)
Similarity:140/270 - (51%) Gaps:40/270 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 LNGTANQAPTRSPTIIKRLRKSTRFKAKQTGKGTPGSGSSQSNGHNSGANGSTGSSVHLAGAGAH 226
            |..|.:...|.|.::.|:..:........||:|..|.|:..:.|  :|..|..|::. .|...|.
  Rat     5 LKPTCSMCKTTSSSMWKKSPQGEILCHHCTGRGGGGGGAGVAGG--TGGGGGFGTAT-FATTSAG 66

  Fly   227 PSNTNKHG---------------------KSGPAGTGG-ATGARNRRALFK-KPAQKTPKVQAST 268
            ||.:|..|                     ||.||.... :|..:.||.:|| |...|.|:..::.
  Rat    67 PSQSNGGGGGKQSKQEIHRRSARLRNTKYKSAPAAEKKVSTKGKGRRHIFKLKNPIKAPESVSTI 131

  Fly   269 RFVRSLFHKGSYIQIGDIVSIVDSEQNL-YYAQIRGLLVDAYCEKSAFLTWLIPTQDSPDPQEGF 332
            ....|:|:||.|.||||:||::|.:... |||||||.:.|.||||||.|||||||..||..|  |
  Rat   132 VTAESIFYKGVYYQIGDVVSVIDEQDGKPYYAQIRGFIQDQYCEKSAALTWLIPTLASPRDQ--F 194

  Fly   333 DPPTYLIGPDEELSRKLCYLEFVMHAPSNYYFDRSTPFP-LPDVDEYTAQRSGGYIWTRL----P 392
            ||.:|:|||:|:|.||:.|||||.||||.|:..||:||| :|...|      .|||||.:    .
  Rat   195 DPASYIIGPEEDLPRKMEYLEFVCHAPSEYFKSRSSPFPTVPTRPE------KGYIWTHVGPTPA 253

  Fly   393 IVKREKGSGH 402
            |..:|..:.|
  Rat   254 ITMKETVANH 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13367NP_569851.2 None
Gatad1XP_575359.3 ZnF_GATA 9..>33 CDD:294105 3/23 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341549
Domainoid 1 1.000 151 1.000 Domainoid score I4243
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 152 1.000 Inparanoid score I4269
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007227
OrthoInspector 1 1.000 - - oto98540
orthoMCL 1 0.900 - - OOG6_108552
Panther 1 1.100 - - LDO PTHR13340
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5332
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.890

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