DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment su(sable) and EMB1789

DIOPT Version :9

Sequence 1:NP_001284753.1 Gene:su(sable) / 31012 FlyBaseID:FBgn0003575 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_200503.1 Gene:EMB1789 / 835795 AraportID:AT5G56930 Length:675 Species:Arabidopsis thaliana


Alignment Length:704 Identity:134/704 - (19%)
Similarity:226/704 - (32%) Gaps:244/704 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DLEDGEIDDDEEDEQQSSKIQV-QKKTFVGDDDVQFVGVEAKNQNDDEDVVYVGPSTDAVCLQNS 79
            ||:|..:.....|...|.::.: :.:..|.:..|..  .||.:.||.:.|..|        |:..
plant   107 DLQDASVVSRHTDFFDSFELMINETQDSVPESCVNL--FEALDVNDYDIVQNV--------LEKP 161

  Fly    80 NSTKSKKPRPLEDDHASSIELAIANALKKKGIEPPMPRMRSSNQDTSDQSLEGSGEGLATANPLL 144
            |.....:..|:|.:              ||..|  :|:...||:..|...||       ..|..:
plant   162 NIATQVQVDPVESE--------------KKAEE--VPKSVESNEVISSGVLE-------ACNGTV 203

  Fly   145 QSTRSSRRRKRKKEREREQKKDKEQQNRSRRDENDVSVVPGGVEDMDEYEMMNVRGGSPPPGGAA 209
            |               ||.:.:|...| |....:.||.:.|| :|::|.|:              
plant   204 Q---------------REMELEKPVDN-SPVLVDSVSRIVGG-DDVEEGEI-------------- 237

  Fly   210 PPLSSCGQRFSGADWD---MDDGSAATGAAGLGAGGGGGYNSH-SSYDSYSDEETNGPGLMNQRR 270
                      ||.|.|   ::|...............|..||| :|:.|:..|..|   :.||.:
plant   238 ----------SGDDNDDMLVEDDETVERHEEYQVSQDGTGNSHLTSHKSFGVEVMN---VDNQAK 289

  Fly   271 RTRR--DNEKEHQRGVNNRKRRDRDRLEGGLAGSGSKRNRRDSGEGGGGGQEKMG-GSNRV---- 328
            :..:  .||.:...|.:.:||.         |.|...:.|:.:.......||::. |..::    
plant   290 KIDQTFSNEAKMDPGTSIKKRS---------APSKDAKARKRAKARIKRAQERIALGVKKLKLKP 345

  Fly   329 ---EPRKLELCKFYLMDCCAKRDKCSYMH-------------------------------KEFPC 359
               :|:.::.|:.||...|.:.|||.:.|                               .::||
plant   346 VAPKPKPIKYCRHYLKGRCHEGDKCKFSHDTIPETKCSPCCYFATQSCMKGDDCPFDHDLSKYPC 410

  Fly   360 KYYYLGMDCYAGDDCLFYH-GEPLSEQLRNVLLKHMETAPKEILGDFKRISRDIAIVQMTRRHEQ 423
            ..:.....||.||.|||.| |.|.|                  ..|....:..::..::|     
plant   411 NNFITKGFCYRGDSCLFSHKGTPQS------------------ASDTPSANVTVSSTKIT----- 452

  Fly   424 LCDQLNRENTWNSIGCGLMGKRQDHQMQQQQQQLQHQQLQQQQEQQQTQQQAAADGGGCIPSLLD 488
                                                   ......|:|::|:..|....:|::..
plant   453 ---------------------------------------AASFSPQKTKKQSVRDAIAKLPAIQA 478

  Fly   489 MV------INPPLSENKRKSRWTEKMGAKAAAGAAGSSERDS--TSPDAKPL------PPHLDLA 539
            .|      :.|....|:|.|            ..|.||:.:.  |.|...||      |..:...
plant   479 RVSSSVAFLKPSSHSNQRNS------------SDASSSKINEHVTPPQVPPLRKPSVAPKGMSFL 531

  Fly   540 NLSHVLSAENMAKLNKLGITN--------LEQMLQ---VPFGQLTEAGLTLVEIGEIQRKAEDAK 593
            :|... |.|:..|.:.....|        |:|..|   :|.|  ...|::.:.....::|..:.:
plant   532 SLDKT-SQEDTVKASSASKPNTDNSDSQTLKQSQQGSFLPLG--PPKGISFLSFASEEQKTLNRE 593

  Fly   594 PQTQAELES-STPPSKRETEANNSNSKSNGLIMVDYTQYLKDAHVSFSGNDPLD 646
            ||..|..:: .|.||        |:.:|:.|..:......:.|.|....|||.:
plant   594 PQKPASSKNLKTTPS--------SHIQSSLLSAMKLAAEFESAKVERGNNDPTE 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(sable)NP_001284753.1 None
EMB1789NP_200503.1 YTH1 <345..466 CDD:227416 27/182 (15%)
zf-CCCH_4 356..375 CDD:407881 7/18 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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