DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(sable) and Zc3h6

DIOPT Version :9

Sequence 1:NP_001284753.1 Gene:su(sable) / 31012 FlyBaseID:FBgn0003575 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_848491.2 Gene:Zc3h6 / 78751 MGIID:1926001 Length:1177 Species:Mus musculus


Alignment Length:1372 Identity:261/1372 - (19%)
Similarity:418/1372 - (30%) Gaps:536/1372 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DLEE-DLEDGEIDDD--EEDEQQSSKIQVQKKTFVGDDDVQFVGVEAKNQNDDEDVVYVGPSTDA 73
            |.|: :||||||||.  ||.:.|.:|                     :|:....:..|       
Mouse    10 DREDGELEDGEIDDAGFEETQDQEAK---------------------ENEKQKNEKAY------- 46

  Fly    74 VCLQNSNSTKSKKPRPLEDDHASSIELAIANALKKKGIEPPMPRMRSSNQDTSDQSLEGSGEGLA 138
                ..:..|.||.|..:.......|       |.|...|       |..|:||.||:...|.:.
Mouse    47 ----RKSRKKHKKEREKKKSKRRKHE-------KHKHNSP-------SGDDSSDYSLDSDVERMQ 93

  Fly   139 TAN------------PLLQSTRSSRRRKRKKEREREQKKDKEQQNRS------------------ 173
            ::.            |..|..|.|......|:.:..:|.:.::...|                  
Mouse    94 SSRKKRTSSYRDYDVPFSQHRRISGSYMTSKKSQHNKKTNSKEYAESSFYSDDYFGNYSDDNFGN 158

  Fly   174 ---RRDENDVSVVPGGVEDMDEYEMMNVRGGS--------------PPPG------------GAA 209
               :..|.|.|      ..:..|.......||              .|||            |..
Mouse   159 YSNQEGEEDFS------SQLKYYRQSQESSGSSFSKESGKKLRSKGSPPGTEYRIKSFDVSHGHL 217

  Fly   210 PP-----LSSCGQR-------FSGADWDMDDGSAATGAAGLGAGGGGGYNSHSSYDSYSDEETNG 262
            .|     ...||.|       |||    |||                       :..||.     
Mouse   218 LPKKIRRKEHCGARVIKGPYVFSG----MDD-----------------------FQEYSK----- 250

  Fly   263 PG----LMNQRRRTRRDNEKEHQRGVNNR-KRRDRDRLEGG-LAGSGSKRNRRDSGEGGGGGQEK 321
            ||    :|.|        |..:|..|.:: |:..:..|||. :.|...|.|.....|        
Mouse   251 PGKKWKVMTQ--------EFINQHTVEHKGKQICKYFLEGRCIKGDHCKFNHDAELE-------- 299

  Fly   322 MGGSNRVEPRKLELCKFYLMDCCAKRDKCSYMHKEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQL 386
                     :|.|:||:||...|.|.:.|.|||.|||||:|:.|..||.||.|.|.| :.|:::.
Mouse   300 ---------KKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSGAKCYQGDKCKFSH-DDLTKET 354

  Fly   387 RNVLLKHMETAPKEILGDFKRISRDI---AIVQMTRRHEQLCDQLNRENTWNSIGCGLMGKRQDH 448
            |.:|.|.: .|.:|::.:.:|...::   .|..:.:...               |.||:....:|
Mouse   355 RKLLDKVL-NADEELVNEDERELEELRKRGITPLPKPPP---------------GVGLLPTPSEH 403

  Fly   449 QMQQQQQQLQHQQLQQQQEQQQTQQQAAADGGGCIPSLLDMVI---------------------N 492
            ......:......|....::              ||||.::|:                     :
Mouse   404 FPFSDPEDDFETDLSDDMKK--------------IPSLFEIVVKPTVDLAHKIGKKPPAFYNSTS 454

  Fly   493 PPLSENKRKSRWTEKM---------GAKAAAGAAGSSERDSTSPDAKPL-----PPHLD----LA 539
            ||..:.:..|...::|         |:|...|.. |..|...||...|.     ||..:    |.
Mouse   455 PPGPQFEESSHCPQRMYSSESSPGPGSKVPQGCE-SPVRHPGSPGHHPCVGPPGPPMQENPSLLP 518

  Fly   540 NLSHVLSAENMAKLNKLGITNLEQM----------------LQVP-FGQLTEAGLTLVEIGEIQR 587
            :.|.::...:.|.    |:..|:.:                ::|| ....:.|.|......|:||
Mouse   519 SSSEIVGPHSQAG----GLVQLDTLPSMGGAYHSPGFPGHSVKVPRESHSSPASLYQQMPSEMQR 579

  Fly   588 KA------------EDAKPQTQA----------------ELESSTPPSKRETEANNSNSKSNGLI 624
            .|            :|..||..|                |.....||..|:|....|...|:   
Mouse   580 SADSESMQGSAEFYDDYYPQHAAHNFQPPDNSADEMWHEEFAQQQPPIARDTAHLGSGPNSS--- 641

  Fly   625 MVDYTQYLKDAHVSFSGNDP----------LDDDRDDDEQLIIDDGNDSTAEEDQQPKKAKAPPA 679
                ::......:|.||..|          ....::|:|.........|:.|||.         .
Mouse   642 ----SRMTSHCPLSASGLPPAVQRALFIPLTQRYQEDEEPAGTQPHRASSKEEDD---------T 693

  Fly   680 ATHESSTEEAPLPSVFDLPSFMNNMLGQG--SSARQLLPASATSPNQENAHLPGGDQSTHKSAPI 742
            |...||:||..               |.|  |..|.|...:.|..||:   ||    .|..|.| 
Mouse   694 ANWYSSSEEEE---------------GSGVKSILRTLQKQTGTLRNQQ---LP----PTELSVP- 735

  Fly   743 GGGTSTNVLGRILFGDKQSDPEARAAFYRDI-------------IRNPFKAHSGDG--------- 785
               |...:.......::..||..|....:||             :.:|.|.....|         
Mouse   736 ---TDPRLAKEKRKRNQVVDPRLRTVPRQDIKKPHESVPVDLRLVWDPKKLRGNGGAPGGSSARG 797

  Fly   786 -DVDSSNENSNSNSHSLTPTPTPEPGSQSPKPEDHDQDMP-ELPVIAPALP-PTTPSLYV---RR 844
             :.|..:.|:.:|             .:|.:.||.|:|.. ||...|..:| .::|.:.:   |.
Mouse   798 AEFDLRHTNAGAN-------------HKSKRREDDDEDSERELREKAFLIPLDSSPGIVLQDPRS 849

  Fly   845 SMYDFDPVKEQ---------EH---GRQELLTEEKEQYQRDTDMRLPFEPM-------------K 884
            .:..|..:|..         :|   ..::||.....:....:.:.||..|:             .
Mouse   850 QLRQFSHIKMDIILNKPNFAKHIVWAPEDLLPVPLPKPDPVSSINLPLPPLIADQRLNRLWNTKS 914

  Fly   885 HYMPATEIDAAIFSHTPIRWQLHEVTIEESSYAQIRASALHKEQRELRDPRMR-----RILGLPE 944
            .:..|..:|....:...:.....|..:|:|       ..||....:|.|||::     |:..||.
Mouse   915 DHQGALSLDPTSAAKAKLSLTHREGCLEQS-------GDLHSSGGKLGDPRLQKNFDPRLHRLPN 972

  Fly   945 T-------PDNSGPLGSVPI------MGPSSFSVD-NIARCATTIASPDL--------------- 980
            |       .|:.....::|:      :..||.:.. |:|.....:.:|.|               
Mouse   973 TESHQVTAKDSHSSRSALPLARWNPALSQSSTAAPINVASVTPPLYAPKLSSEGLPPGTSSSVLS 1037

  Fly   981 -------------------------------ETAVRDSTPSSPPPSVVNLPSMSVPPPSMRVP-- 1012
                                           ::.:::|..:.|.|..|.:|..:.  .::.||  
Mouse  1038 GISLYDPRDKGSLSAMELSTISSGENTESQKKSGLKNSDKNQPSPGEVIVPQNTT--ANLEVPVD 1100

  Fly  1013 -PPNIQ---------VEKPTVRT-----------DPRRDPRRAVLQAPTKGASTANTTAPNASGG 1056
             |.::|         |:.|.|.:           .|..|||:|  :.|.:.:.|     |:....
Mouse  1101 GPVDMQTDILRSADKVQVPAVHSLPIQALTGLLRPPYSDPRQA--REPGQASPT-----PDEETD 1158

  Fly  1057 SKQISEI 1063
            .|.:.|:
Mouse  1159 DKPLKEV 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(sable)NP_001284753.1 None
Zc3h6NP_848491.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..137 37/172 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..206 5/26 (19%)
ZnF_C3H1 274..295 CDD:214632 6/20 (30%)
ZnF_C3H1 301..325 CDD:214632 12/23 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416 5/47 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 446..587 27/145 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 622..654 7/38 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 670..767 30/131 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 780..826 11/58 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 942..988 13/52 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1043..1101 7/59 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1132..1162 9/36 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 127 1.000 Inparanoid score I4659
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43028
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13119
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.080

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