DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(sable) and zc3h4

DIOPT Version :9

Sequence 1:NP_001284753.1 Gene:su(sable) / 31012 FlyBaseID:FBgn0003575 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_005157662.1 Gene:zc3h4 / 557823 ZFINID:ZDB-GENE-100330-1 Length:1340 Species:Danio rerio


Alignment Length:1399 Identity:288/1399 - (20%)
Similarity:442/1399 - (31%) Gaps:584/1399 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LADEPLIDLEEDLEDGEIDDD-EEDEQQSSKIQVQKKTFVGDDDVQFVGVEAKNQNDDEDVVYVG 68
            |.||...|.|  ||:||::|| .|.|..|.::.                       |.:|     
Zfish    23 LTDERQEDGE--LEEGELEDDGGEAEVPSGEVA-----------------------DPQD----- 57

  Fly    69 PSTDAVCLQNSNSTKSKKPRPLEDDHASSIELAIANALKKKGIEPPMPRMRSSNQDTSDQSLEGS 133
                             |||..::.|||                      .|::::.|.:     
Zfish    58 -----------------KPRHSKERHAS----------------------ESNDEEKSHR----- 78

  Fly   134 GEGLATANPLLQSTRSSRRRKRKKERERE--------QKKDKEQQNRSRRDE-NDVSVVPGGVED 189
                             ||||||:|||||        ::|.|.::::|..|| :|.|       |
Zfish    79 -----------------RRRKRKREREREKEKRRAKKKRKSKHKRHQSSSDEYSDYS-------D 119

  Fly   190 MDEY---EMMNVRGGSPP------------PGGAAPPLSSCG-------QRFSG----------- 221
            ..:|   |....|..|||            |.|...|:|..|       |.:.|           
Zfish   120 ESDYSPSEKRKYREYSPPYPPTSQGGYSSAPSGHGGPMSKKGGYMKIDKQGYGGYDDYEEETYEG 184

  Fly   222 ------ADWDMDD------------------------------GSAATGAAGLGAGGG------- 243
                  .|.|.||                              |....|..|.|..||       
Zfish   185 EDDEDMGDDDYDDFAKELNQYRKAKEVGGPRGRGGKNRMKNLRGRGRGGMRGRGGRGGGRGRGRG 249

  Fly   244 --GGYN---------------------SHSSYDSYSDEETNGPGLMNQRRRTRRDNEKEHQRGVN 285
              ||.|                     ....||.||.|       :||.|:|:       .||..
Zfish   250 KMGGENDDGDGMYGEDMEYGDDDYDNMGDDDYDDYSKE-------LNQYRKTK-------DRGRG 300

  Fly   286 NRKRRDRDRLEGGLAGSGSKRNR-RDSGEGGGG----------------------------GQEK 321
            .:..|.|.|   |..|.|..|.| |:.|.|.||                            |.||
Zfish   301 GKGGRGRGR---GKGGRGMNRGRGRNRGRGRGGDQGPDDDNSGDKDMDGSGPPRRNDQEKHGPEK 362

  Fly   322 MGG-------------------SNRVE-PRKLELCKFYLMDCCAKRDKCSYMHKEFPCKYYYLGM 366
            .|.                   |:.:| |:|.||||||:...||:.:.|.|||.:||||.::...
Zfish   363 KGKAICKYYIEGRCTWGDHCNFSHDIELPKKKELCKFYITGFCARAENCPYMHGDFPCKLFHTTG 427

  Fly   367 DCYAGDDCLFYHGEPLSEQLRNVLLKHMETAPKEILGDFKRISRDIAIVQMTRRHEQLCDQLNRE 431
            :|..|::|:|.| :.|:|..:.:|       .|.:..|.:..:.|          |:..::|.::
Zfish   428 NCVNGEECMFSH-DSLTEDTQELL-------DKMLAEDAEAGAED----------EKEVEELKKQ 474

  Fly   432 NTWNSI-----GCGLMGK-------RQDHQMQQQQQQLQHQQLQQQQEQQ--------------- 469
            .. |.:     |.||:..       .....|:.......|..:.......               
Zfish   475 GI-NPLPKPPPGVGLLPTPPRPSPGDSSTPMEFGMPSAPHGNIPPSGPPAPGPGVGPVPGPGPGP 538

  Fly   470 ---------QTQQQAAADGGG------------------C-------IPSLLDMVINPPLSENKR 500
                     ........|||.                  |       ||||.::|:.|       
Zfish   539 GPGPGIGPCPVPPPPCTDGGTFQGPPPTGPPPPMGPPPVCGGNAGKKIPSLFEIVVKP------- 596

  Fly   501 KSRWTEKMG------AKAAAGAAGSSERDSTSPDAKP--LPP---HLDLANLSHVLSAENMAKLN 554
            ..:..:|:|      |.|:||.||........|.|.|  .||   |:.... .|        :..
Zfish   597 TGQLAQKLGVRGPVPANASAGTAGPQGPPPGPPGAPPPRFPPPPGHMGPGG-PH--------ERP 652

  Fly   555 KLGITNLEQMLQVPFGQLTEAGLTLVEIGEIQRKAEDAKPQTQAELESSTPPSKRETEANNSNSK 619
            .:|.:|:.|            |...:..|         .|..|..::...||:.........::.
Zfish   653 PMGPSNMNQ------------GPPSMGTG---------PPMMQNFVQGEGPPNPGMMSPGAGSAG 696

  Fly   620 SNGLIMVDYTQYLKDAHVSFSGNDPLDDDRDDDEQLIIDDGNDSTAEEDQQPKKAKAPPAATHES 684
            :|  ...::.|..:...:..||       ||.|....:..||.:    ||.|        ..|.|
Zfish   697 NN--FYDNFYQQQQAMSIDGSG-------RDCDNFQGMGGGNFN----DQSP--------GNHNS 740

  Fly   685 STEEAPL---PS---VFDLPSFM------------NNMLGQGSSARQLLPASATSPNQENAHLPG 731
            .:.|:..   ||   ...:|.|:            .........||:|.....|....|     |
Zfish   741 GSMESGANVGPSNQTGMAVPDFLPPAQRVLFMRLQQKQQEDEERARRLADGGGTERENE-----G 800

  Fly   732 GDQSTHKSA--PIGGGTSTNVLGRILFGDKQ-----------SDPEARAAFYRDIIRNPFKAHSG 783
            ||.:...|:  ..|||:.|::| :.|....|           |||..:.:       .|..|.|.
Zfish   801 GDSANWYSSEDEDGGGSVTSIL-KTLRQQTQNQGPAKPDGAPSDPRLQKS-------QPTPAPSR 857

  Fly   784 DGDVDSSNE-----NSNSN-----SHSLTPTPTPEPGSQSPKPEDH---DQDMPELPVIAPALPP 835
            ..|...:.:     |::|:     |.||:|||:      .|:...|   ....||.|::....|.
Zfish   858 PADPRLARDPRLSRNTDSSQAPEASSSLSPTPS------DPRLARHAAAHASKPEPPLVYKPPPL 916

  Fly   836 TTPSLYVRRSMYDFDPVKEQEHGRQELLTEEKEQYQRDTDMRLPFEPMKHYM---PATEIDAAIF 897
            |.|:            ..|:|.|         |:..||..:.:|.:|:....   |.:::..  |
Zfish   917 TAPA------------SNEEEEG---------ERMLRDKPVPIPLDPLMGMALRDPRSQLQQ--F 958

  Fly   898 SHTPIRWQLHEVTIEESSYAQIRASALHKE--------QRELR------------DPRMRRILGL 942
            ||..     .:|.:::.|::  :|.....|        :::|.            |||:.|    
Zfish   959 SHIK-----KDVVLQKPSFS--KAVLWSPEDLIPIPIPKQDLLPLPPGIPPVTTIDPRLSR---- 1012

  Fly   943 PETPDNSGPLGSVPIMGPSSFSVDNIARCATTIASPDLETAVR-----DSTPSSP---------- 992
            .:.|.:|..|....:..|:.....|    .::.:.||.|...|     :::.|||          
Zfish  1013 TQPPHHSSILPPTVVPPPAPVEQSN----QSSSSLPDFELLSRILKTVNASSSSPVQGASTGISS 1073

  Fly   993 PPSVVNLPSMSVPPPSMRVPP--PNIQVEKPTVRTD-----PRRDPRRAVLQAPTKGASTANTTA 1050
            ||||.:  ...:.|...|..|  |.:|.:|..::|.     |:..|..:.|..|    |::.|.|
Zfish  1074 PPSVSS--EKPIDPRMARKTPADPRLQPQKSALKTTSEPLVPQGSPPTSSLSPP----SSSPTIA 1132

  Fly  1051 PN-----ASGGSKQISEIRSLLQVSNWYNNLGTN 1079
            |.     ::|||     :||:...|...::.||:
Zfish  1133 PYDPRLLSAGGS-----VRSVGSASVGSSSGGTS 1161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(sable)NP_001284753.1 None
zc3h4XP_005157662.1 ZnF_C3H1 366..387 CDD:214632 1/20 (5%)
ZnF_C3H1 393..417 CDD:214632 13/23 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I4806
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25811
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13119
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.080

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