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Protein Alignment su(sable) and Clp
DIOPT Version :9
Sequence 1: | NP_001284753.1 |
Gene: | su(sable) / 31012 |
FlyBaseID: | FBgn0003575 |
Length: | 1325 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_477156.1 |
Gene: | Clp / 33259 |
FlyBaseID: | FBgn0015621 |
Length: | 296 |
Species: | Drosophila melanogaster |
Alignment Length: | 188 |
Identity: | 40/188 - (21%) |
Similarity: | 65/188 - (34%) |
Gaps: | 66/188 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 318 GQEKMGGS----NRVEPRKLELCKFYLMDCCAKRDKCSYMHK----EFPCKYYYLGMDCYAGDDC 374
|||...|| ..:...:..:||.:|...|.|.|:|.::|: :.|..|:|...:.....:|
Fly 48 GQECDKGSACPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKEC 112
Fly 375 LFYHGEPLS---------------------EQLRNVL--------------LKHMETAPKEILGD 404
.|.|.:|.| :.||.|| .|||. |...|..
Fly 113 PFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGPSCKHMH--PHFELPP 175
Fly 405 FKRISRDIAIVQMTRRHEQL--CDQLNRENTWNSIGCGLMGKRQDHQMQQQQQQLQHQ 460
...:.:| :.|::| |.. ||.:|.:. :..:|....|:|:
Fly 176 LAELGKD-------QLHKKLPTCHY-----------CGELGHKA-NSCKQYVGSLEHR 214
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
su(sable) | NP_001284753.1 |
None |
Clp | NP_477156.1 |
YTH1 |
12..175 |
CDD:227416 |
30/128 (23%) |
ZnF_C3H1 |
66..90 |
CDD:214632 |
8/23 (35%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5084 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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