DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(sable) and Zc3h3

DIOPT Version :9

Sequence 1:NP_001284753.1 Gene:su(sable) / 31012 FlyBaseID:FBgn0003575 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_742119.1 Gene:Zc3h3 / 223642 MGIID:2663721 Length:950 Species:Mus musculus


Alignment Length:700 Identity:128/700 - (18%)
Similarity:206/700 - (29%) Gaps:276/700 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LQNSNST------KSKKPRPLEDDHASSIELAIANALKKKGIEPPMPRMRSSNQDTSD------Q 128
            |::.|..      |::||:|..|......:||..:   |.|:.|...:.::|:...|.      |
Mouse   331 LESGNKATLGTVGKTEKPQPKVDPEVRPEKLATPS---KPGLSPSKYKWKASSPSASSSSSFRWQ 392

  Fly   129 SLEGS-------------------------------GEGLATANPLLQSTRSSRRRKR------K 156
            |..||                               ||...:|..:...|:..|||..      |
Mouse   393 SEAGSKDHTSQLSPVPSRPTSGDRPAGGPSSLKPLFGESQLSAYKVKSRTKIIRRRGNTSIPGDK 457

  Fly   157 K--------------EREREQKKDKE-------------QQNRSRRDENDVSVVPGGVEDMDEYE 194
            |              :|.|:..:.|.             |.||.|     :..:|.....:...|
Mouse   458 KNSPTTATTSKNHLTQRRRQALRGKNSPVLRKTPHKGLMQVNRHR-----LCCLPSSRTHLSTKE 517

  Fly   195 MMNVRGGSPPP-----------------------------------------------------G 206
            ..:|..|.||.                                                     |
Mouse   518 ASSVHMGIPPSNKVIKTRYRIVKKTPSSSFGAPSFPSSLPSWRARRIPLSRSLVLNRLRPAITGG 582

  Fly   207 GAAPPLSSCGQRFSGADWDMDDGSAATGAAGLGAGGGGGYN-SHSSYDSYSDEETNGPGLMNQRR 270
            |.|||                 |:......|....||..|. |.:.....|...::|...:  .|
Mouse   583 GKAPP-----------------GTPRWRNKGYRCIGGVLYKVSANKLSKTSSRPSDGNRTL--LR 628

  Fly   271 RTRRDNEKEHQRGVNNRKRRDRDRLEGGLAGSGSKRNRRDSGEGGGGGQEKMGGSNRVE------ 329
            ..|.|......|.:.:|      .::..||.....:.:::..........:.|..||.|      
Mouse   629 TGRLDPATTCSRSLASR------AIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGECCPYIH 687

  Fly   330 -PRKLELCKFYLMDCCAKRD-KCSYMH----KEFP-CKYYYLGMDCYAGDDCLFYHGEPLSEQLR 387
             |.|:.:|..::...|.|.| .|.:.|    ::.| |.|:..|: | :..:|      |.|    
Mouse   688 DPEKVAVCTRFVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGI-C-SNSNC------PYS---- 740

  Fly   388 NVLLKHMETAPK-EILGDFKRISRDIAIVQMTRRHEQLCDQLNRENTWNSIGCGLMGKRQDHQMQ 451
                 |:..:.| |:..||.:....:. .:..::|..||....|...     |          .:
Mouse   741 -----HVYVSRKAEVCSDFLKGYCPLG-AKCKKKHTLLCPDFARRGI-----C----------PR 784

  Fly   452 QQQQQLQHQQLQQQQEQQQTQQQAAADGGGCIPSLLDMVINPPLSENK-----RKSRWTEKMGAK 511
            ..|.||.|      :.|::..::.||..   ||...|   ..|.|:..     ||...|::...:
Mouse   785 GSQCQLLH------RNQKRHGRRTAAPP---IPGPSD---GAPRSKASAGHVLRKPTTTQRSVRQ 837

  Fly   512 AAAGAAGSSERDSTSPDAKPLPPHLDLANLSHVLSAENMAKLNKLGITNLEQMLQVPFGQLTEAG 576
            .::|.|..:|    :|.:.|..|.: ||:.|.:.|                              
Mouse   838 MSSGLASGAE----APASPPPSPRV-LASTSTLSS------------------------------ 867

  Fly   577 LTLVEIGEIQRKAEDAKPQTQAELESSTPPSKRETEA---NNSNSKSNGL 623
                       ||..|...:.:...||..||..:.||   ..|.:.|:||
Mouse   868 -----------KATAASSPSPSPSTSSPAPSLEQEEAVSGTGSGTGSSGL 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(sable)NP_001284753.1 None
Zc3h3NP_742119.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..106
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..220
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..489 30/160 (19%)
zf-CCCH 663..689 CDD:279036 4/25 (16%)
ZnF_C3H1 718..743 CDD:214632 9/41 (22%)
ZnF_C3H1 745..771 CDD:214632 5/26 (19%)
zf-CCCH 770..792 CDD:279036 7/36 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 793..950 33/165 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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