DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(sable) and CPSF4

DIOPT Version :10

Sequence 1:NP_476754.1 Gene:su(sable) / 31012 FlyBaseID:FBgn0003575 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_011514057.1 Gene:CPSF4 / 10898 HGNCID:2327 Length:274 Species:Homo sapiens


Alignment Length:272 Identity:53/272 - (19%)
Similarity:89/272 - (32%) Gaps:80/272 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 GQEKMGGSNRVEPRKLELCKFYLMDCCAKRDKCSYMH----KEFPCKYYYLGMDCYAGDDCLFYH 378
            |.:|.|.:         :|:|:|...|.|...|.:.|    |...||::..|: |..||.|.|.|
Human    32 GMDKSGAA---------VCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGL-CKKGDQCEFLH 86

  Fly   379 GEPLSE-----------QLRNVLLKHMETAPKEILGDFKRISRDIAIVQMTRRHEQLCDQLNREN 432
            ...:::           :..|.....:...|:..:.|.....|...      :|..||    |..
Human    87 EYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFC------KHGPLC----RHR 141

  Fly   433 TWNSIGC----------GLMGKRQDHQMQQQQQQLQHQQLQQQQEQQQTQQQAAADGGGCIPSLL 487
            ....:.|          |...|.....:...:.:|.....:|....||||..|....        
Human   142 HTRRVICVNYLVGFCPEGPSCKFMQLLVTSPRFELPMGTTEQPPLPQQTQPPAKQSN-------- 198

  Fly   488 DMVINPPLSENKRKSRWTEKMGAKAAAGAAGSSERDSTSPDAKPLPPHLDLANLSHVLSAENMAK 552
                ||||..:....:.|.:                ::||:.:..|      .:..|:.::|.:.
Human   199 ----NPPLQRSSSLIQLTSQ----------------NSSPNQQRTP------QVIGVMQSQNSSA 237

  Fly   553 LNKLGITNLEQM 564
            .|: |...|||:
Human   238 GNR-GPRPLEQV 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(sable)NP_476754.1 None
CPSF4XP_011514057.1 YTH1 <25..>161 CDD:227416 30/148 (20%)
COG5222 <231..>263 CDD:227547 6/19 (32%)

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