DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(sable) and zc3h6

DIOPT Version :10

Sequence 1:NP_476754.1 Gene:su(sable) / 31012 FlyBaseID:FBgn0003575 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001096202.2 Gene:zc3h6 / 100124753 XenbaseID:XB-GENE-6454376 Length:1023 Species:Xenopus tropicalis


Alignment Length:1179 Identity:235/1179 - (19%)
Similarity:366/1179 - (31%) Gaps:481/1179 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SKKPRPLEDDHASSIELA---------IANALKKKGIEPPMPRMRSSNQDTSDQSLEGSGEGLAT 139
            |:.|.|..|.:.:..|.|         ....::..|||       ...||..:...:|       
 Frog     8 SRPPNPALDKNMTDSEHAGDEREDGELEDGEIEDGGIE-------EQTQDIKEAEDQG------- 58

  Fly   140 ANPLLQSTRSSRRRKRKKEREREQKKDKEQQNRSRRDENDVSVVPGGVEDMDEYEM-MNVRGGSP 203
               :::..|.||:|:||   |||:||:|.::....|..     .||. ::..||.. .:...|..
 Frog    59 ---VVKPHRKSRKRRRK---EREKKKEKRRRREKHRHN-----FPGS-DNSSEYSADSDTEHGER 111

  Fly   204 P-----------------PGG-AAPPLSSCGQRFSGADWDMDDGSAATGAAGLGAGGGGGYNSHS 250
            |                 ||. ..||.:...:..:    |.||.|..:         .|.||...
 Frog   112 PHKDIVYRDYDVQYSQHGPGSYITPPNAKHKKNVN----DYDDYSNYS---------DGNYNEEE 163

  Fly   251 SYDSYSDEETNGPGLMNQRRRTRRDNEKEHQRGVNNRK--RRDRDRLEGGLA---GSGSKRNRRD 310
            ..|.:.::      |.:.|:.....|..|.....||.|  ::.|::.:.|.:   |.|:::..:|
 Frog   164 EEDDFVEQ------LKHYRQAKENSNLAEPPFKKNNIKGNQQGREQQQTGFSYGRGRGNQKKCKD 222

  Fly   311 SGEGGG------------------------------------------------------GGQEK 321
            .|.|.|                                                      |.|.|
 Frog   223 RGRGRGVHKGPNPYFQDGFQEDSKPVKKWVNLSQEFINLHTVEHKGKQICKYFLEKRCIKGDQCK 287

  Fly   322 MGGSNRVEPRKLELCKFYLMDCCAKRDKCSYMHKEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQL 386
            ......: .:|.|:||||:...|.|.|.|.|||.|||||:|:.|..||.||:|.|.| :||::..
 Frog   288 FDHDAEI-GKKREICKFYIQGYCTKGDNCLYMHNEFPCKFYHTGAKCYQGDNCKFSH-DPLTDDT 350

  Fly   387 RNVLLKHMETAPKEILGDFKRISRDIAIVQMTRRHEQLCDQLNRENTWNSIGCGLM---GKRQDH 448
            |.:|.|.:.|  :|:                  :||.       ||     |...|   ||..:.
 Frog   351 RELLHKVLNT--EEV------------------QHED-------EN-----GASEMPRHGKFYNP 383

  Fly   449 QMQQQQQQLQHQQLQQQQEQQQTQQQAAADGGGCIP----SLLDMVIN----------PPLSE-- 497
            .....|.|..||.:...:...::....:...||..|    ::.:.|||          ||..:  
 Frog   384 PYYGMQYQGCHQPMYNSEPLPESGPNVSPMTGGIPPFNASTMQNPVINNQRDGYNLSSPPFLQST 448

  Fly   498 -----------------------------NKRKSRWTEKMGAKAAAGAAGSSERDSTSPDAKPLP 533
                                         |.:....|||  .:....|:.:.:.|....:|..|.
 Frog   449 EEATHTNSYQCSQNTTGFYDNYYSQQAVHNTQSCNTTEK--TQGILFASMNKQPDGVEQNASQLQ 511

  Fly   534 PHL-----DLANLSHVLSAENMAKLNKLGITNLEQMLQVPFGQLTEAGLTLVEIGEIQ------- 586
            ..:     |::|. :..|.|.    :..|:|:|.:.|:      .:|.:..:...|.|       
 Frog   512 RSVSRDEDDISNW-YTSSEEE----DGSGVTSLLKTLR------NQANIARMNSQEQQPLPINCD 565

  Fly   587 -RKAEDAKPQTQAELESSTPPSKRETEANNSNSKSNGL---IMVDYTQYLKDAHVSFSGN----- 642
             |.|:|...:.||     :.|..:.|||.|..:..:..   :|.| .:.||...:|.:.|     
 Frog   566 PRLAKDRALRIQA-----SDPRVKGTEAQNPGNHGDSADRRVMRD-PRKLKSGDISANSNAKTES 624

  Fly   643 -----------DPLDDDRDDDEQ-----------------------------------LIIDDGN 661
                       ..||||.||.|:                                   :::...|
 Frog   625 TQVQSGSKVTQKGLDDDEDDGEKELREKAAIIPLEMLPGVNLRDPRCKLRQFSHIKMDILLTKPN 689

  Fly   662 DST----AEEDQQPKKAKAPPAATHESSTEEAPLPSVFDLPSFMNNMLGQGSSARQLLPASATSP 722
            .:.    |.||..|   ..||...|.||. ..|||.:.               |.|.|..|.:.|
 Frog   690 FAKLIVWAPEDLLP---VPPPKPDHVSSI-NLPLPPLI---------------ADQRLNKSKSLP 735

  Fly   723 NQ--ENAH----------------LPGGDQSTHKSAPIGGGTSTNVLGRILFGDKQSDPEARAAF 769
            |:  ::||                ||..::||.:     ||.:      ::| :|..||..:   
 Frog   736 NEFHQSAHDLRLDPRLETKAKQAVLPARNRSTDQ-----GGLN------VIF-NKLGDPRLQ--- 785

  Fly   770 YRDIIRNPFKAHSGDGDVDSSNENSNSNSHSLTPTPTPEPGSQSPKPEDH------------DQD 822
                 :||            .:....:.||...|..|.:..|....|...            ..|
 Frog   786 -----KNP------------QSRLQRAASHDSQPAITKDHNSSKADPRTAARSASLTASGLCKSD 833

  Fly   823 MPELPVIAPALPPT-----TPSLYVRR-SMYD-----------------FDPVKEQEH---GRQE 861
            ...||..||.|...     |||..::. |:||                 .||.:|.|.   ....
 Frog   834 QNSLPPYAPKLSSPNIRLGTPSSILKNISLYDPRNNETSVAVSDSKPTIKDPKEESEKNLGNPNA 898

  Fly   862 LLTEEKEQYQRDTDMRLPFEPMKHYMPATEIDAAIFSHTPIRWQLHEVTIEESSYAQIRASALHK 926
            |...|.|:....|            .||:..:..:          .:.|.||:            
 Frog   899 LCKSETEKLNSST------------QPASSTEEPV----------QQNTSEET------------ 929

  Fly   927 EQRELRDPRMRRILGLPETPDNSGPLGSVPIMGPSSFSVDNIARCATTIASPDLETAVRDSTPSS 991
            |::.:..|..:.||..|:      |:...|...||:                             
 Frog   930 EEKTVDSPNEKCILDKPQ------PVPDAPEPQPSA----------------------------- 959

  Fly   992 PPPSVVNLP 1000
             .|:|.|||
 Frog   960 -APAVHNLP 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(sable)NP_476754.1 None
zc3h6NP_001096202.2 zf_CCCH_4 272..290 CDD:465719 3/17 (18%)
zf-CCCH_3 296..>353 CDD:464787 30/57 (53%)
zf_CCCH_4 301..319 CDD:465719 9/17 (53%)

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