DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dredd and Casp6

DIOPT Version :10

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_113963.2 Gene:Casp6 / 83584 RGDID:70967 Length:277 Species:Rattus norvegicus


Alignment Length:281 Identity:72/281 - (25%)
Similarity:131/281 - (46%) Gaps:44/281 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 YCSTQI----DALKLTRENAGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIEVF 303
            |.|.::    :..|:..:..|.|||.|.::|..:::           |..|.||:.|::.|...|
  Rat     8 YRSREVLDPAEQYKMDHKRRGTALIFNHERFFWHLA-----------LPERRGTNADRDNLTRRF 61

  Fly   304 SSMGYNVEAYDNVDHMGIIERIRSACDRSLV-RDSLVVFILSHGFEEAVYASNSIAMKITDIEDL 367
            |.:|:.|:.::::....::.:|......|.| .|..:...||||....:||.:: .::|..:..|
  Rat    62 SELGFEVKCFNDLRAEELLLKIHEVSTSSHVDADCFLCVFLSHGEGNHIYAYDA-KIEIQTLTGL 125

  Fly   368 L----CSYDTLYYKPKLLIIQACQ-----------EKLVHK--KKPNELFRIDVTTV-SPDQHID 414
            .    |  .:|..|||:.|||||:           :.:.|:  |..:.:.::|..:| :.....|
  Rat   126 FKGDKC--QSLVGKPKIFIIQACRGSQHDVPVVPLDVVDHQTDKLDDNVTQVDAASVYTLPAGAD 188

  Fly   415 MLRAMSTVNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILTIVTNEVSKKR-------GSN 472
            .|...|...||.:.|.|..|||:|..||:.:.|..:|....::||:|..:||::|       |:.
  Rat   189 FLMCYSVAEGYYSHRETVNGSWYIQDLCEMLARHGSSLEFTELLTLVNRKVSQRRVDFCKDPGAI 253

  Fly   473 DESMVPNVKSTFRQHVYFPPR 493
            .:..||...|...:.::|.|:
  Rat   254 GKKQVPCFASMLTKKLHFCPK 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:444667 69/265 (26%)
Casp6NP_113963.2 CASc 20..273 CDD:214521 69/266 (26%)
Tri-arginine exosite. /evidence=ECO:0000250|UniProtKB:P55212 25..27 0/1 (0%)
130's region. /evidence=ECO:0000250|UniProtKB:P55212 108..125 3/17 (18%)

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