DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dredd and Casp2

DIOPT Version :9

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_038964243.1 Gene:Casp2 / 64314 RGDID:69274 Length:470 Species:Rattus norvegicus


Alignment Length:507 Identity:119/507 - (23%)
Similarity:193/507 - (38%) Gaps:157/507 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LRRLGFCWQELRMHYLPHIAGITLHVHP-----LLKSLYRMCEEL-------SLVQSGRLLLDVR 146
            |.|.|....:.|...|. :.|    :||     |.|:...:.::|       .|::...:.|::|
  Rat    12 LHRKGLMAADRRSRILA-VCG----MHPDHQETLKKNRVVLAKQLLLSELLEHLLEKDIITLEMR 71

  Fly   147 EKVESQ-------------------QAGD----PLRFYDPAYLEIFLLDWLTRRSIKLGDINAAG 188
            |.::::                   ||.|    .||.....:||..||..|              
  Rat    72 ELIQAKGGSFSQNVELLNLLPKRGPQAFDAFCEALRETRQGHLEDLLLTTL-------------- 122

  Fly   189 SDVQLLVGHL-------------KSNGLQAQANLLKDTIISNAPEPDAAGTAAMAVKQEIESDNQ 240
            ||:|.::..|             :|.....|:.|..||:..:....|  |...:.||.......|
  Rat   123 SDIQHILPPLSCDYDSSLPFSVCESCPPHKQSRLSTDTMEHSLDNGD--GPPCLQVKPCTPEFYQ 185

  Fly   241 QSYCSTQIDALKLTRENAGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIEVFSS 305
            ..|   |: |.:|..:..|:||:::           |:.|.....|..|.|.|||...|:.:|..
  Rat   186 AHY---QL-AYRLQSQPRGLALVMS-----------NVHFTGEKDLEFRSGGDVDHTTLVTLFKL 235

  Fly   306 MGYNVEA-YDNVD-------HMGIIERIRSACDRS------------LVRDSLVVFILSHGFEEA 350
            :||||.. ||...       :.||.::.....:..            .|.||.:|.:||||.|..
  Rat   236 LGYNVHVLYDQTAQFHRFQLYSGIYKKYPKGQEMQEKLQNFAQLPAHRVTDSCIVALLSHGVEGG 300

  Fly   351 VYASNSIAMKITDIEDLLCSYD-----TLYYKPKLLIIQAC-----------QEKLVHKKKP--- 396
            :|..:.   |:..::::...:|     :|..|||:..||||           |:...|.:.|   
  Rat   301 IYGVDG---KLLQLQEVFRLFDNANCPSLQNKPKMFFIQACRGDETDRGVDQQDGKNHAQSPGCE 362

  Fly   397 ------NELFRIDVTTVSPDQHIDMLRAMSTVNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIA 455
                  .||.::.:.|.|     ||:...:.:.|.||:|:|:.|||:|.:|......|:...|:|
  Rat   363 ESDAGKEELMKMRLPTRS-----DMICGYACLKGNAAMRNTKRGSWYIEALTQVFSERACDMHVA 422

  Fly   456 DILTIVTNEVSKKRGSNDESMVPNVK-----------STFRQHVY----FPP 492
            |:| :..|.:.|:|    |...|..:           ||..|.:|    :||
  Rat   423 DML-VKVNALIKER----EGYAPGTEFHRCKEMSEYCSTLCQQLYLFPGYPP 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:294037 75/299 (25%)
Casp2XP_038964243.1 CARD_CASP2 32..118 CDD:260040 16/85 (19%)
CASc 192..465 CDD:214521 75/296 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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