DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dredd and casp3b

DIOPT Version :9

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001041531.2 Gene:casp3b / 566604 ZFINID:ZDB-GENE-070607-1 Length:285 Species:Danio rerio


Alignment Length:298 Identity:81/298 - (27%)
Similarity:133/298 - (44%) Gaps:41/298 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 DTIISNAPEPDAAGTAAMAVKQEIESDNQQSYCSTQID-ALKLTRENAGIALIINQQKFHRNVSR 275
            ||:  :|.:.||..::::.....::.| .:|:....:| ..|....|.|..||||.:.||:... 
Zfish    10 DTV--DARQSDAKESSSVTDPGLVQMD-AKSHSDDNVDYQYKTNYPNLGQCLIINNKNFHKRTG- 70

  Fly   276 DNMKFLSPDPLRRRDGTDVDKERLIEVFSSMGYNVEAYDNVDHMGIIERIRSACDRSLVRDSL-V 339
                      :..|:|||.|.:::.|.||.:|:.|..|:::....::..:..|......:.:: .
Zfish    71 ----------MGVRNGTDEDAKKVFETFSQLGFKVGHYNDLTVSQMMALLNKASQEDHSKSAMFA 125

  Fly   340 VFILSHGFEEAVYAS-NSIAMK--ITDIEDLLCSYDTLYYKPKLLIIQACQEKLVHK------KK 395
            ..:||||.:..:|.: |||.:|  ........|:  :|..||||..||||:...:..      ..
Zfish   126 CVLLSHGDDGLIYGTDNSIELKRLFAHFRGDRCT--SLVGKPKLFFIQACRGTDLDSGIECDGVG 188

  Fly   396 PNELFRIDVTTVSPDQHIDMLRAMSTVNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILTI 460
            ..|..||.|       ..|.|.|.||..||.|.|:...|||||.||||.:.:......|..::|.
Zfish   189 DEETQRIPV-------EADFLYAYSTAPGYYAWRNVANGSWFISSLCDMLLKYGKQLEIMQVMTR 246

  Fly   461 VTNEV-------SKKRGSNDESMVPNVKSTFRQHVYFP 491
            |.::|       |...|.:.:..:|.:.|...:.:|||
Zfish   247 VNHKVALEFESSSNLPGFDGKKQIPCIVSMLTKELYFP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:294037 73/257 (28%)
casp3bNP_001041531.2 CASc 47..284 CDD:237997 71/256 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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