DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dredd and casp10

DIOPT Version :9

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_685430.4 Gene:casp10 / 557302 ZFINID:ZDB-GENE-070608-2 Length:520 Species:Danio rerio


Alignment Length:550 Identity:127/550 - (23%)
Similarity:218/550 - (39%) Gaps:122/550 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LDTIDQNDLIYV------ERDMNFAQKVGLCF-------LLYGDDHSDATYILQKLLAMTRSD-- 59
            |...:..||:::      .||:|........|       ||..:|.|    :|.:||::|:..  
Zfish    22 LSADELQDLLFLCSDLLCSRDLNTVSSGRQLFTLLQNQDLLSLEDPS----LLIELLSITKRTRL 82

  Fly    60 --FPQSDLLIKFA---------KSRPETWRRHLVEALCIIGARKVLRRLGFCWQELR-MHYLPHI 112
              ..|||..::.:         :.|...:|:.|.|.           ....|.|:|: :.:|   
Zfish    83 MRSLQSDACMQTSGTADQPLQQQQRISRYRQFLYEL-----------SESICDQDLKNIKFL--- 133

  Fly   113 AGITLHVHPLLKSLYR--MCEELSLVQ----------SGRLLLDVREKVESQ---QAGDPLRFYD 162
                     |:|:|.|  :.:.|:|:|          .|...|||.:::.:.   ..|..:..|.
Zfish   134 ---------LMKTLSRKKLEQNLTLLQLFLEMEKEDLLGENNLDVLQRIFADIYPALGRKINQYK 189

  Fly   163 PAYLEIFLLDWLTRRSIKLGDINAAG---SDVQLLVGHLKSNGLQAQANLLKDTIISNAPEPDAA 224
            ...|....:...|.....:.|:.:|.   |.|:::...:....|...|:....   .|:...|:.
Zfish   190 EENLNGVFIAQETEGISSIADLPSAQTSLSSVEMIDREMDEITLNENASGFSG---DNSQHSDSV 251

  Fly   225 GTAAMAVKQEIESDNQQSYCSTQIDALKLTRENAGIALIINQQKFHRNVSRDNMKFLSPDPLRRR 289
            .:..::     ||.......::.::..::..|..|:.||||...|            |......|
Zfish   252 NSGIIS-----ESSEMPQIENSMVEQYEMKGERRGVCLIINNYDF------------SACGWLNR 299

  Fly   290 DGTDVDKERLIEVFSSMGYNVEAYDNVDHMGIIERIRSACDRSLVR-DSLVVFILSHGFEEAVYA 353
            :|||:|.:.|.:||..:|:.:....:.....|::.:.....:...: |.:|..|||||....:..
Zfish   300 EGTDIDHDSLRDVFEWLGFEILTRRDCTGDQILQALMDLSTQDHTQADCVVCCILSHGRLNDIIG 364

  Fly   354 SNSIAMKITDIEDLL----CSYDTLYYKPKLLIIQACQEKLVHKKKPNELFRIDVTTVSPDQHI- 413
            .:..|:...::.:.|    ||  :||.||||..||||:.....:....:.|..|...::.|..: 
Zfish   365 VDGKAVPFKELMETLSPFRCS--SLYQKPKLFFIQACRGTQNQRAVFPQTFTEDEDVLASDAGVP 427

  Fly   414 --------DMLRAMSTVNGYAALRHTQTGSWFIGSLCD----AIDRRSASEHIADILTIVTNEVS 466
                    |.|.|||||..||:.|....|:|||.||||    .:.|   ...:..|||.|..:||
Zfish   428 RDSIPEMADYLMAMSTVPWYASYRDKSKGTWFIQSLCDNLRLLVPR---GNDLLSILTKVNADVS 489

  Fly   467 KKRGSNDES----MVPNVKSTFRQHVYFPP 492
            ||   :|:|    .:|..:.:..:.|.|||
Zfish   490 KK---SDKSGLKKQMPQPEFSLTRTVVFPP 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:294037 74/261 (28%)
casp10XP_685430.4 DED_Caspase_8_10_r1 11..87 CDD:260059 15/68 (22%)
DED_Caspase_8_10_r2 108..190 CDD:260042 20/104 (19%)
DUF4603 <200..>256 CDD:292020 9/58 (16%)
CASc 273..515 CDD:237997 73/261 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578012
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.700

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