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Protein Alignment Dredd and caspb

DIOPT Version :9

Sequence 1:	NP_477249.3	Gene:	Dredd / 31011	FlyBaseID:	FBgn0020381	Length:	494	Species:	Drosophila melanogaster
Sequence 2:	NP_690840.2	Gene:	caspb / 259303	ZFINID:	ZDB-GENE-020812-1	Length:	404	Species:	Danio rerio

Alignment Length:	362	Identity:	79/362 - (21%)
Similarity:	138/362 - (38%)	Gaps:	105/362 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   198 LKSNGLQAQANLLKDTIISNAPEP-----------------DAAGTAAMAVKQEIESDNQQSY-- 243
            |:||.|:.|:...::...|..|:|                 :.||:..:   |.|::|.|:..
Zfish    83 LESNLLKVQSQGQENKQNSEEPQPIPQIISQPIQQIISQPINNAGSEDL---QPIQADWQRPRQI 144

  Fly   244 --CSTQI---------DALKLTR---ENAGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDV 294
              ||.:.         |.:...|   :..|:||:|.           |::|.:..  ..|:|.|.
Zfish   145 IPCSQETKNTLLKAHGDDIYTPRSGTQRKGLALLIT-----------NIQFANTQ--HNRNGADR 196

  Fly   295 DKERLIEVFSSMGYNVEAYDNVDHMGIIERIRSACDRSLVR------DSLVVFILSHGF----EE 349
            |:|....:..|:|:.|..|.|:..    :.||.|.:....|      ||..:.|:|||.    ::
Zfish   197 DEENAEWLLRSLGFAVIKYRNLSG----KDIRRAVENFSKRREHEDADSTFIVIMSHGTRIDNKD 257

  Fly   350 AVYASNS----IAMKITDIEDLLCSYDTLYYKPKLLIIQACQ----------------EKLVHKK 394
            |:...:.    |....:.:..:.|  ..|..|||:::||||:                :..||.:
Zfish   258 AIVGVSDDVYFIEETFSHLNSVNC--PALIDKPKVILIQACRGGQSSGVLAQDSVFASDSWVHME 320

  Fly   395 KPNELFRIDVTTVSPDQHIDMLRAMSTVNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILT 459
            |                  |.:..|||:....|.|:...||:||..:.|.....:..:.|.::..
Zfish   321 K------------------DFVCFMSTMPNTFAYRNPIEGSFFISYIVDVFCSSAHRDDIMELFR 367

  Fly   460 IVTNEVSK-KRGSNDESMVPNVKST-FRQHVYFPPRL 494
            .||..:.| :|......::|.::.| ..:..|..|.|
Zfish   368 KVTLRMEKDQRFQGQAKLLPCIERTSISKRFYLFPGL 404

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.