DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dredd and Casp1

DIOPT Version :9

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_036894.3 Gene:Casp1 / 25166 RGDID:2274 Length:402 Species:Rattus norvegicus


Alignment Length:375 Identity:88/375 - (23%)
Similarity:148/375 - (39%) Gaps:103/375 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LLD--VREKVESQQAGDPLRFYDPAYLEIF--LLDWLTRRSIKLGDINAAGSDVQLLVGHLKSNG 202
            |||  :.::|.:|:..|.::..:...:|..  |.|.:|::..:..         |:.:.::.:..
  Rat    25 LLDELLEKRVLNQEEMDTIKLANITVMEKARDLCDHVTKKGPRAS---------QMFITYICNED 80

  Fly   203 ------LQAQANLLKDTII----SNAPEPDAAGTAAMAVKQEIESD--------NQQSYCSTQID 249
                  |:.|:....:|:.    |....|.::.|     |:::..:        ....:|..:| 
  Rat    81 CYLAEILELQSGPSAETVFVTEDSKGGHPFSSET-----KEKLNKEGGAFPGPSGSLKFCPLEI- 139

  Fly   250 ALKLTREN-------------AGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIE 301
            |.||.:||             ..:||||....|..              |.||.|.|||...:..
  Rat   140 AQKLWKENHSEIYPIMKTPTRTRLALIICNTDFQH--------------LSRRVGADVDLREMKL 190

  Fly   302 VFSSMGYNVEAYDNVDHMGIIERIR--SACDRSLVRDSLVVFILSHGFEEAVYA---SNSIA--M 359
            :...:||.|:..:|:..:.:.:.::  :||......||..:..:|||.:|.:..   ||.:|  :
  Rat   191 LLQDLGYTVKVKENLTALEMTKELKEFAACPEHKTSDSTFLVFMSHGLQEGICGITYSNEVADIL 255

  Fly   360 KITDI----EDLLCSYDTLYYKPKLLIIQACQ-EK----LVHKKKPN--ELFRIDVTTVSPDQ-- 411
            |:..|    ..|.|  .:|..|||::|||||: ||    |:.....|  |.|..|  .:..|.  
  Rat   256 KVDTIFQMMNTLKC--PSLKDKPKVIIIQACRGEKQGVVLLKDSVGNSEEGFLTD--AIFEDDGI 316

  Fly   412 ---HI--DMLRAMSTVNGYAALRHTQTGSWFIGSL----------CDAID 446
               ||  |.:...|:.....:.||...||.||.||          ||..|
  Rat   317 KKAHIEKDFIAFCSSTPDNVSWRHPVQGSLFIESLIKHMKEYAWSCDLED 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:294037 67/243 (28%)
Casp1NP_036894.3 CARD_CASP1-like 6..87 CDD:260036 11/70 (16%)
CASc 152..400 CDD:214521 63/233 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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