DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dredd and Pea15a

DIOPT Version :9

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001316798.1 Gene:Pea15a / 18611 MGIID:104799 Length:130 Species:Mus musculus


Alignment Length:65 Identity:12/65 - (18%)
Similarity:27/65 - (41%) Gaps:22/65 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 AVKQEIESDNQQSYCSTQIDALKLTRENAGIALIINQQKFHRNVSRDNMKFLS--------PDPL 286
            |.|::|.|:..:          ::|..:|..:.:    :.|..:.:||:.::.        ||.|
Mouse    26 ACKEDIPSEKSE----------EITTGSAWFSFL----ESHNKLDKDNLSYIEHIFEISRRPDLL 76

  Fly   287  286
            Mouse    77  76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:294037 8/43 (19%)
Pea15aNP_001316798.1 DED_PEA15 2..85 CDD:260045 12/65 (18%)
Microtubule-binding. /evidence=ECO:0000255 98..107
Microtubule-binding. /evidence=ECO:0000255 122..129
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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