DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dredd and casp3a

DIOPT Version :10

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571952.1 Gene:casp3a / 140621 ZFINID:ZDB-GENE-011210-1 Length:282 Species:Danio rerio


Alignment Length:277 Identity:82/277 - (29%)
Similarity:125/277 - (45%) Gaps:53/277 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 QIDA--------LKLTRENAGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIEVF 303
            |:||        ..|...|.|..:|||.:.|.|...      ::|     |:|||||...::.||
Zfish    28 QVDAKPQSHAFRYSLNYPNIGHCIIINNKNFDRRTG------MNP-----RNGTDVDAGNVMNVF 81

  Fly   304 SSMGYNVEAYDNVDHMGIIERIRSAC--DRSLVRDSLVVFILSHGFEEAVYASNSIAMKITDIED 366
            ..:||.|:.|::.....|::.:.:..  |.|... |||..:|||| :|.|:.....::.:..:..
Zfish    82 RKLGYIVKVYNDQTVAQIMQVLTTVAHDDHSRCA-SLVCVLLSHG-DEGVFFGTDTSVDLKSLTS 144

  Fly   367 LL----CSYDTLYYKPKLLIIQACQ----------EKLVHKKKPNELFRIDVTTVSPDQHIDMLR 417
            |.    |  .:|..||||..||||:          :...|...|:...||.|       ..|.|.
Zfish   145 LFRGDRC--PSLVGKPKLFFIQACRGTELDPGVETDHTDHPDIPDGRERIPV-------EADFLY 200

  Fly   418 AMSTVNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILTIVTNEV-------SKKRGSNDES 475
            |.|||.||.:.|:|.||||||.|||:.:.:..:...:..|:|.|.::|       |...|.:.:.
Zfish   201 AYSTVPGYYSWRNTMTGSWFIQSLCEMMTKYGSELELLQIMTRVNHKVALDFESTSNMPGFDAKK 265

  Fly   476 MVPNVKSTFRQHVYFPP 492
            .:|.:.|...:.:||.|
Zfish   266 QIPCIVSMLTKEMYFTP 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:444667 78/262 (30%)
casp3aNP_571952.1 CASc 39..280 CDD:237997 76/262 (29%)

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