DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dredd and Casp2

DIOPT Version :9

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_031636.1 Gene:Casp2 / 12366 MGIID:97295 Length:452 Species:Mus musculus


Alignment Length:541 Identity:119/541 - (21%)
Similarity:192/541 - (35%) Gaps:182/541 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HLDTIDQNDLIYVERDMNFAQKVGLCFLLYGDDH----SDATYILQKLLAMTRSDFPQS-DLLIK 68
            |.:|:.:|.::       .|:::.|..||   :|    ...|..:::|:......|.|: :||..
Mouse    36 HQETLKKNRVV-------LAKQLLLSELL---EHLLEKDIITLEMRELIQAKGGSFSQNVELLNL 90

  Fly    69 FAKSRPETWRRHLVEALCIIGARKVLRRLGFCWQELRMHYLPHIAGITL----HVHPLLKSLY-- 127
            ..|..|:.:     :|.|     :.||       |.|..:|..:...||    ||.|.|...|  
Mouse    91 LPKRGPQAF-----DAFC-----EALR-------ETRQGHLEDLLLTTLSDIQHVLPPLSCDYDT 138

  Fly   128 ----RMCEELSLVQSGRLLLDVREKVESQQAGDPLRFYDPAYLEIFLLDWLTRRSIKLGDINAAG 188
                .:||.....:..||..|..|.......|.|.....|...|.:                   
Mouse   139 SLPFSVCESCPPHKQLRLSTDATEHSLDNGDGPPCLLVKPCTPEFY------------------- 184

  Fly   189 SDVQLLVGHLKSNGLQAQANLLKDTIISNAPEPDAAGTAAMAVKQEIESDNQQSYCSTQIDALKL 253
                           ||...|                                        |.:|
Mouse   185 ---------------QAHYQL----------------------------------------AYRL 194

  Fly   254 TRENAGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIEVFSSMGYNVEAYDNVDH 318
            ..:..|:||:::           |:.|.....|..|.|.|||...|:.:|..:||||....:...
Mouse   195 QSQPRGLALVLS-----------NVHFTGEKDLEFRSGGDVDHTTLVTLFKLLGYNVHVLHDQTA 248

  Fly   319 MGIIERIRSACD--RSLVRDSLVVFILSHGFEEAVYASNSIAMKITDIEDLLCSYD-----TLYY 376
            ..:.|::::...  ...|.||.||.:||||.|..:|..:.   |:..::::...:|     :|..
Mouse   249 QEMQEKLQNFAQLPAHRVTDSCVVALLSHGVEGGIYGVDG---KLLQLQEVFRLFDNANCPSLQN 310

  Fly   377 KPKLLIIQAC-----------QEKLVHKKKP---------NELFRIDVTTVSPDQHIDMLRAMST 421
            |||:..||||           |:...|.:.|         .||.::.:.|.|     ||:...:.
Mouse   311 KPKMFFIQACRGDETDRGVDQQDGKNHTQSPGCEESDAGKEELMKMRLPTRS-----DMICGYAC 370

  Fly   422 VNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILTIVTNEVSKKRGSNDESMVPNVK----- 481
            :.|.||:|:|:.|||:|.:|......|:...|:||:| :..|.:.|:|    |...|..:     
Mouse   371 LKGNAAMRNTKRGSWYIEALTQVFSERACDMHVADML-VKVNALIKER----EGYAPGTEFHRCK 430

  Fly   482 ------STFRQHVY----FPP 492
                  ||..|.:|    :||
Mouse   431 EMSEYCSTLCQQLYLFPGYPP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:294037 73/281 (26%)
Casp2NP_031636.1 CARD_CASP2 32..118 CDD:260040 23/108 (21%)
CASc 192..447 CDD:214521 73/278 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..349 3/21 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6533
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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