DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dredd and Casp4

DIOPT Version :10

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_446188.2 Gene:Casp4 / 114555 RGDID:621757 Length:373 Species:Rattus norvegicus


Alignment Length:397 Identity:91/397 - (22%)
Similarity:154/397 - (38%) Gaps:83/397 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ESQQAGDPLRFYDPAYLEIFLLDWLTR----RSIKLGD------INAAGSDVQ-LLVGHLKSNGL 203
            |:.....||:..:....| ||.::|.:    ..:||.:      .||..||.: :.|..||....
  Rat     3 ENNHPDKPLKVLEELGKE-FLTEYLEKLVQSNVLKLKEEEKQKFNNAERSDKRWVFVDVLKRKHN 66

  Fly   204 QAQANLLKDTIISNAPEPDAAGTAAMAVKQEIESDNQQSYCST------------QIDALKLTRE 256
            |....||:..:  |.......|.|.:.:::..||.:....||:            :|..:|.|..
  Rat    67 QVGKMLLQTFL--NVDSGSHHGEANLEMEEPEESVDTLKLCSSEEFTRLCREKKQEIYPIKETNG 129

  Fly   257 NAGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIEVFSSMGYNVEAYDNVDHMGI 321
            ....||||...:|         |.||     .|.|.::|...:..:...:||:|...:.:...|:
  Rat   130 RTRKALIICNTEF---------KHLS-----LRYGANIDISGMKGLLEELGYDVVVKEELTAEGM 180

  Fly   322 IERIR--SACDRSLVRDSLVVFILSHGFEEAVYASNSIAMKITDIEDLLCSYDTLYY-------- 376
            ...::  :|.......||..:.::|||..:.:..:    |......|:|. |||:|.        
  Rat   181 ESEMKDFAALSEHQTSDSTFLVLMSHGTLQGLCGT----MHSEATPDVLL-YDTIYQIFNNCHCP 240

  Fly   377 ----KPKLLIIQAC-----------QEKLVHKKKPNELFR---IDVTTVSPDQHI--DMLRAMST 421
                |||::|:|||           :....|..:..:|.|   .|...:|   |:  |.:...||
  Rat   241 GLRDKPKVIIVQACRGGNPGEVWIRESSGAHSYRAVDLPRNMEADAVRMS---HVEKDFIALYST 302

  Fly   422 VNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILTIVTNEVSKKRGSNDESMVPNV-KSTFR 485
            ...:.:.|....||:||..|.......:.|.|:.||...|.....|   ::..|.:|.: ::|..
  Rat   303 TPHHLSYRDKTRGSYFISKLISCFRIHACSCHLFDIFLKVQQSFEK---ASINSQMPTIDRATLT 364

  Fly   486 QHVY-FP 491
            ::.| ||
  Rat   365 RYFYLFP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:444667 64/272 (24%)
Casp4NP_446188.2 CARD_CASP1-like 5..85 CDD:260036 19/82 (23%)
CASc 122..371 CDD:214521 62/273 (23%)

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