DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dredd and Casp4

DIOPT Version :9

Sequence 1:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_446188.2 Gene:Casp4 / 114555 RGDID:621757 Length:373 Species:Rattus norvegicus


Alignment Length:397 Identity:91/397 - (22%)
Similarity:154/397 - (38%) Gaps:83/397 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ESQQAGDPLRFYDPAYLEIFLLDWLTR----RSIKLGD------INAAGSDVQ-LLVGHLKSNGL 203
            |:.....||:..:....| ||.::|.:    ..:||.:      .||..||.: :.|..||....
  Rat     3 ENNHPDKPLKVLEELGKE-FLTEYLEKLVQSNVLKLKEEEKQKFNNAERSDKRWVFVDVLKRKHN 66

  Fly   204 QAQANLLKDTIISNAPEPDAAGTAAMAVKQEIESDNQQSYCST------------QIDALKLTRE 256
            |....||:..:  |.......|.|.:.:::..||.:....||:            :|..:|.|..
  Rat    67 QVGKMLLQTFL--NVDSGSHHGEANLEMEEPEESVDTLKLCSSEEFTRLCREKKQEIYPIKETNG 129

  Fly   257 NAGIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIEVFSSMGYNVEAYDNVDHMGI 321
            ....||||...:|         |.||     .|.|.::|...:..:...:||:|...:.:...|:
  Rat   130 RTRKALIICNTEF---------KHLS-----LRYGANIDISGMKGLLEELGYDVVVKEELTAEGM 180

  Fly   322 IERIR--SACDRSLVRDSLVVFILSHGFEEAVYASNSIAMKITDIEDLLCSYDTLYY-------- 376
            ...::  :|.......||..:.::|||..:.:..:    |......|:|. |||:|.        
  Rat   181 ESEMKDFAALSEHQTSDSTFLVLMSHGTLQGLCGT----MHSEATPDVLL-YDTIYQIFNNCHCP 240

  Fly   377 ----KPKLLIIQAC-----------QEKLVHKKKPNELFR---IDVTTVSPDQHI--DMLRAMST 421
                |||::|:|||           :....|..:..:|.|   .|...:|   |:  |.:...||
  Rat   241 GLRDKPKVIIVQACRGGNPGEVWIRESSGAHSYRAVDLPRNMEADAVRMS---HVEKDFIALYST 302

  Fly   422 VNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILTIVTNEVSKKRGSNDESMVPNV-KSTFR 485
            ...:.:.|....||:||..|.......:.|.|:.||...|.....|   ::..|.:|.: ::|..
  Rat   303 TPHHLSYRDKTRGSYFISKLISCFRIHACSCHLFDIFLKVQQSFEK---ASINSQMPTIDRATLT 364

  Fly   486 QHVY-FP 491
            ::.| ||
  Rat   365 RYFYLFP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DreddNP_477249.3 CASc 252..492 CDD:294037 64/272 (24%)
Casp4NP_446188.2 CARD_CASP1-like 5..85 CDD:260036 19/82 (23%)
CASc 122..371 CDD:214521 62/273 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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