DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mybbp1A and Mybbp1a

DIOPT Version :9

Sequence 1:NP_476593.2 Gene:Mybbp1A / 31010 FlyBaseID:FBgn0001341 Length:1133 Species:Drosophila melanogaster
Sequence 2:XP_006246864.1 Gene:Mybbp1a / 60571 RGDID:62062 Length:1344 Species:Rattus norvegicus


Alignment Length:1266 Identity:273/1266 - (21%)
Similarity:478/1266 - (37%) Gaps:354/1266 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LKKSKKEKPAETEEKENTASNANLKVSQINKAVFVVF-----KKMQGSQL--TKKMINSLITLLR 101
            :|...|.:||...|.......:.|:.|:    .|:.|     |..|.::|  |:|::..|.|...
  Rat     4 MKSPTKAEPASPAEAPQGDRRSLLEHSR----EFLDFFWDIAKPDQETRLRATEKLLEYLRTRPS 64

  Fly   102 DDTNAEQRTATTGYVLKRLIRSTG-----ADDMKTVSLAASYIHCILNAVPAIDAFEVLETLKRD 161
            |   :|.:     |.|||||...|     |....:::||.     :|.:...|...::|..::..
  Rat    65 D---SEMK-----YALKRLITGLGVGREAARPCYSLALAQ-----LLQSFEDIQLCDILGQIQEK 116

  Fly   162 LAVGSQQRG-KEDSLAAVGQLVTAFCILQTPQFAKAEPKLVTAV--FQILA---AQLKGREYLVS 220
            ..:.:..:. ...:|.|  .|.....:.|:.:..|.:..|:..|  .:||:   ..|:|:.  |.
  Rat   117 YNLQAMNKAMMRPTLFA--NLFGVLALFQSGRLVKDKEALMKCVRLLKILSHHYNHLQGQP--VK 177

  Fly   221 LCGDILAVSFKQLPAAIFEEYVWPLLQPELNKPLSG-LKVNTCDVLLAVHLTFSSVLGRENILAS 284
            ...|||:    ::|.::|:|.        |.|.|.| :||                     ||:|
  Rat   178 ALVDILS----EVPESMFQEI--------LPKVLKGDMKV---------------------ILSS 209

  Fly   285 LWPKKPVYTQLFDLYFSGSTIHSDGVYARLASFLVNGGKDMLAAWQQYIDSKQPLKLNAAKACAI 349
                 |.|.:||       .:....|.|.|.|.:  |..|:      :.:...|..:|..|..|.
  Rat   210 -----PKYLELF-------LLARQRVPAELESLV--GSVDL------FSEDNIPSLVNILKVAAN 254

  Fly   350 QVLSHVLLNFKPREEQLILDIFTPTCVQFLLHECSSVK-W----DKGEGKKPSLKKLKEICFKFE 409
            .|          ::||.:.|: ....::..|.|....: |    ::|..||||... ..:||:..
  Rat   255 SV----------KKEQKLPDV-ALNLLRLALQENKFERFWKEVLEEGLLKKPSYTS-SYMCFRLL 307

  Fly   410 G-SLVLCYEKQFQ-----------------------------------------NDDNKLHLLLK 432
            | ||.|..::|.|                                         .||.|....:.
  Rat   308 GASLPLLSDEQLQLVMRGDLIRHFGEHMVVSKSQNPLRFIPEISAYVGTFLEGCQDDPKRQFTVM 372

  Fly   433 LLEHTLQLDSVISLPRFCQKLINQLSVESLHKLYDYYNNKLYSLEDEDRVSRVHCLNQMQLILNH 497
            :....:....:..:|.| .::...|:.|:|.. |..:...::...|.|.:......||.::.:..
  Rat   373 VAFTAITNQGLPVMPTF-WRVTRFLNTEALQN-YVTWLRDMFLQPDLDSLVDFSTANQKRVQVAS 435

  Fly   498 SKLSQTAKWR-QKQLNYLLLAGLFHLDASKKPCEAAQASAF--------SRQCAARCEE------ 547
            ..:.:...:| :|.:.:.|::.:.||...|......|.:.|        :::...:..|      
  Rat   436 LNVPERTVFRLRKWIIHRLVSLVDHLHLEKDEAVVEQIARFCLFHAFFKTKKATPQIPETKQHFS 500

  Fly   548 ---------IFLG---SLLHKCS------------GLP---GLCQLLQKTLSYLNKELGQPDAES 585
                     :.:.   |||...|            |.|   .|.||....|.: |:.:...    
  Rat   501 FPLEDGNRGVIVSAFFSLLQTLSVKFRQTPDLAENGKPWTYRLVQLADMLLKH-NRNVANV---- 560

  Fly   586 KLRSPRDESLQKAWKQVE---KLLERPSKESDVVGQSFEALILFVSLALCTKIPPSITVLEDLII 647
               :|.....::||.|:.   |.||..|.|:..:  :|:.|:|.|.|.|......|..||.|:..
  Rat   561 ---TPLTAQQRQAWDQMMSTLKELEAQSSETRAI--AFQHLLLLVGLHLFKSPAESCDVLGDIQT 620

  Fly   648 CRKNALQ------KSKEQVNEELKWQDVLTDALLQLLLQTGHFWREFVQLVATALIPHLEHGNLE 706
            |.|.:::      :|:.:.::|..|.:|:.:.||.||.|..:..|:.|:.|...:..||....|:
  Rat   621 CIKKSMEQNLRRSRSRAKASQEPVWVEVMVEILLSLLAQPSNLMRQVVRSVFGHVCSHLTPRGLQ 685

  Fly   707 QVLEVLNMNKNPLSKK----SDGEEE-----SDDELDKEESLKDSSD-DSEDEDEDEEEDEGEDD 761
            .:|.|||...|...:.    :|.:|:     .|.:.|.|:|....|| ||||.:|.||||..:|.
  Rat   686 LILAVLNPETNEDEEDNVVVTDTDEKQLKHGEDADSDSEDSKNSESDVDSEDGEESEEEDRDKDV 750

  Fly   762 AESHLAQIRESVRQALVNDGDADDDGASSVDWNDVDEEQGERLNAALERSF------QMFRPKSR 820
            ......|:.|.::......|:.::           :||.|:....||:::.      |..|.::|
  Rat   751 DPGFRQQLMEVLQAGNALGGEEEE-----------EEELGDEAMMALDQNLASLFAEQKMRIQAR 804

  Fly   821 KAQEKERPTKSERIDSTNLLHFRIRALDLLELFITKKPTQSVILDVLHCVFQVYSHCAADSKLQS 885
            . :||.:..|.:::..    .|:||||||:|:.:||:|...:||::|                  
  Rat   805 H-EEKNKLQKEKQLRR----DFQIRALDLIEVLVTKQPEHPLILELL------------------ 846

  Fly   886 LREASLKLLKKILARNIELKENQ----STAPILEAIEQL---------MSSGEEHSEEDQENGKQ 937
              |..|.::::.:......|:.|    .||.|.  :..|         :..|.|......|...|
  Rat   847 --EPLLNIIQRSMRSRGSTKQEQDLLHKTARIF--MHHLCRARHYCHEVEPGAEALHAQVERLVQ 907

  Fly   938 PASRQAKRDIIIWRDRCFAYLV-------SQASADG----------EPKKSAVWP---LLVEF-- 980
            .|..||...:.::......||:       ::...||          |||.|.|..   |.::|  
  Rat   908 QAGNQADASVALYYFNASLYLLRVLKGNTTKRYQDGQKLEGADIKSEPKDSEVQTTSCLDLDFVT 972

  Fly   981 ------LELWVAKRRSRLSLASFEALFQSGQWQGVAP-LAVVLASHLDVQKTRSFRRAQILKLLS 1038
                  ||..:.||.|.|::..|..||  .::..:.. |..::..|: ...:|...:||...||.
  Rat   973 RVYSASLESLLTKRNSPLTIPMFLDLF--SRYPVICKNLLPIVVQHV-AGSSRPRHQAQACLLLQ 1034

  Fly  1039 E--QGRRLEVAFKDNNSSSKKFEKQIARY----------VNQLETKASSSKELNLL--------- 1082
            :  ..|.|.|.|:|     .::|:.|::.          :.:.::|....:||::|         
  Rat  1035 KALSARELRVCFED-----PEWEQLISQVLGKTTQTLQTLGEAQSKGEHQRELSILELLNTVFRI 1094

  Fly  1083 -----LKI-------LAQGGEKWQKLREQIQ 1101
                 |.:       :.||  |.|||::.:|
  Rat  1095 VNHEKLSVDLTAFLGMLQG--KQQKLQQNLQ 1123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mybbp1ANP_476593.2 DNA_pol_phi 115..854 CDD:309870 188/864 (22%)
Mybbp1aXP_006246864.1 DNA_pol_phi 70..833 CDD:282748 188/864 (22%)
Rib_recp_KP_reg 1145..1292 CDD:282899
AKAP2_C 1195..>1331 CDD:291950
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1926
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D77672at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13213
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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