DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL36 and RPL36B

DIOPT Version :9

Sequence 1:NP_001284750.1 Gene:RpL36 / 31009 FlyBaseID:FBgn0002579 Length:115 Species:Drosophila melanogaster
Sequence 2:NP_015074.1 Gene:RPL36B / 855826 SGDID:S000006438 Length:100 Species:Saccharomyces cerevisiae


Alignment Length:109 Identity:47/109 - (43%)
Similarity:69/109 - (63%) Gaps:10/109 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEK 65
            |||:..:|||||||.|.:::     |...|:     |..|...:..|||:|.||||:.|.:|||:
Yeast     1 MAVKTGIAIGLNKGKKVTQM-----TPAPKI-----SYKKGAASNRTKFVRSLVREIAGLSPYER 55

  Fly    66 RTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
            |.::|::.|.:|||.|..|:|||:..|||.|.||::||:...|:
Yeast    56 RLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL36NP_001284750.1 Ribosomal_L36e 4..109 CDD:395922 43/104 (41%)
RPL36BNP_015074.1 Ribosomal_L36e 4..99 CDD:395922 43/104 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341318
Domainoid 1 1.000 77 1.000 Domainoid score I2086
eggNOG 1 0.900 - - E1_COG5051
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 81 1.000 Inparanoid score I1613
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53583
OrthoFinder 1 1.000 - - FOG0000794
OrthoInspector 1 1.000 - - otm46880
orthoMCL 1 0.900 - - OOG6_101322
Panther 1 1.100 - - LDO PTHR10114
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2258
SonicParanoid 1 1.000 - - X506
TreeFam 1 0.960 - -
1413.790

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