DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL36 and Rpl36

DIOPT Version :9

Sequence 1:NP_001284750.1 Gene:RpL36 / 31009 FlyBaseID:FBgn0002579 Length:115 Species:Drosophila melanogaster
Sequence 2:NP_071949.1 Gene:Rpl36 / 58927 RGDID:62085 Length:105 Species:Rattus norvegicus


Alignment Length:110 Identity:68/110 - (61%)
Similarity:83/110 - (75%) Gaps:10/110 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEK 65
            ||:||.:|:|||||||.:          |.|...|.||.:...|:||||:||::|||...||||:
  Rat     1 MALRYPMAVGLNKGHKVT----------KNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYER 55

  Fly    66 RTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRKA 110
            |.|||||||||||||||:|:|:|||||||||||||||:|..:|||
  Rat    56 RAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL36NP_001284750.1 Ribosomal_L36e 4..109 CDD:395922 63/104 (61%)
Rpl36NP_071949.1 Ribosomal_L36e 4..94 CDD:279499 62/99 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5110
eggNOG 1 0.900 - - E1_COG5051
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I4471
OMA 1 1.010 - - QHG53583
OrthoDB 1 1.010 - - D1477459at2759
OrthoFinder 1 1.000 - - FOG0000794
OrthoInspector 1 1.000 - - otm45905
orthoMCL 1 0.900 - - OOG6_101322
Panther 1 1.100 - - O PTHR10114
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X506
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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