DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL36 and LOC100361060

DIOPT Version :9

Sequence 1:NP_001284750.1 Gene:RpL36 / 31009 FlyBaseID:FBgn0002579 Length:115 Species:Drosophila melanogaster
Sequence 2:XP_038957125.1 Gene:LOC100361060 / 100361060 RGDID:2320900 Length:106 Species:Rattus norvegicus


Alignment Length:110 Identity:69/110 - (62%)
Similarity:84/110 - (76%) Gaps:9/110 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEK 65
            ||:||.:|:|||||||.:|  ||.       |.....|.:...|:||||:||::|||.|.||||:
  Rat     1 MALRYPMAVGLNKGHKVTK--NVS-------KPRHSRRRRGRLTKHTKFVRDMIREVCGFAPYER 56

  Fly    66 RTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRKA 110
            |.|||||||||||||||:|:|:|||||||||||||||:|..:|||
  Rat    57 RAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL36NP_001284750.1 Ribosomal_L36e 4..109 CDD:395922 64/104 (62%)
LOC100361060XP_038957125.1 Ribosomal_L36e 4..95 CDD:395922 63/99 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5110
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I4471
OMA 1 1.010 - - QHG53583
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000794
OrthoInspector 1 1.000 - - otm45905
orthoMCL 1 0.900 - - OOG6_101322
Panther 1 1.100 - - LDO PTHR10114
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X506
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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