DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13369 and AT2G31390

DIOPT Version :9

Sequence 1:NP_569850.1 Gene:CG13369 / 31007 FlyBaseID:FBgn0025640 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_180697.1 Gene:AT2G31390 / 817697 AraportID:AT2G31390 Length:325 Species:Arabidopsis thaliana


Alignment Length:297 Identity:72/297 - (24%)
Similarity:116/297 - (39%) Gaps:64/297 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLVFGSAIIDFISYTTRLPKAGETL-HGHRFQIGYGGKGANQCVAAARQGSRTALVAKLGADTFG 69
            ::.||..:|||:.     .::|.:| ....|....||..||..:|.:|.|.|:|.|.|||.|.||
plant    10 IVSFGEMLIDFVP-----TESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEFG 69

  Fly    70 SDYLRHLREERVNVNHVEQLAEETTGVAQIAVSDGGENNIIIVVGANNRLSSCD----------- 123
            ......||:..|:...:.......|.:|.:.:...|:...:..     |..|.|           
plant    70 HMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFY-----RNPSADMLLRPDELNLD 129

  Fly   124 -VSSAKALFQEAKVLVCQLETPVEATLTALRAFRGVSIVNAAPAMADTPPELLQ----------- 176
             :.|||.....:..|:      ||...:|  ..:.:.:...|.|:....|.|.:           
plant   130 LIRSAKVFHYGSISLI------VEPCRSA--HLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKT 186

  Fly   177 -------LASIFCVNESEAALMTQMPDIGNIEHAEDAVGKLIAAGANTVIITLGKLGAVFGSADS 234
                   .|.|..|::.|...:|     |:.:..::....|.......:::|||:.|..:.:...
plant   187 QIMSIWDKAEIIKVSDVELEFLT-----GSNKIDDETALTLWHPNLKLLLVTLGEKGCRYYTKTF 246

  Fly   235 KGVCQ--HVAAPSVPPEKVVDTTGAGDAFIGALAHNL 269
            ||...  ||.|        ||||||||:|:|||.:.:
plant   247 KGAVDPFHVNA--------VDTTGAGDSFVGALLNQI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13369NP_569850.1 ribokinase 6..303 CDD:238579 72/297 (24%)
AT2G31390NP_180697.1 PLN02323 1..325 CDD:215183 72/297 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0524
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D918144at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X600
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

Return to query results.
Submit another query.