DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vsp37A and vps37c

DIOPT Version :10

Sequence 1:NP_525034.2 Gene:Vsp37A / 31006 FlyBaseID:FBgn0016038 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001071253.1 Gene:vps37c / 777738 ZFINID:ZDB-GENE-061110-126 Length:323 Species:Danio rerio


Alignment Length:165 Identity:31/165 - (18%)
Similarity:70/165 - (42%) Gaps:14/165 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LPNLCTLSLDELKQLDRDPEFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKR 100
            :..|..||..||:.|..:.|..|....|...:|.:..|.:..:.....::.:|       :::|.
Zfish     1 MEKLQDLSQSELQDLLDNLERVESMALESDEIQNIQLEREMALAANRSLAEQN-------LDMKP 58

  Fly   101 RLSDDFTALKNLGEKCDRLNKKYFKK-------SDEYAPQHIRELLQIAASNADGDCDRHVEHFL 158
            |:.:|...|.....:.:.:.:||.:.       ..:.:|:.:...||...::.:.:.:...:.||
Zfish    59 RIENDRARLVEKYTELEAVREKYKQHCVLRDSIMGQVSPEGLLSRLQAEGASTEAESEALADEFL 123

  Fly   159 NGKTDVQTFLNTYQWSKKISTERKAKEERLGTQLS 193
            .|...:.:||..:...:.::..|:.:.|:|...||
Zfish   124 EGSISLDSFLERFLSLRSLAHTRRVRIEKLQEILS 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsp37ANP_525034.2 Mod_r 42..185 CDD:462117 26/149 (17%)
vps37cNP_001071253.1 Mod_r 5..150 CDD:462117 26/151 (17%)
PHA02682 <198..>302 CDD:177464
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.