DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsp37A and vps37bb

DIOPT Version :9

Sequence 1:NP_001259101.1 Gene:Vsp37A / 31006 FlyBaseID:FBgn0016038 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001025385.1 Gene:vps37bb / 566797 ZFINID:ZDB-GENE-050913-110 Length:231 Species:Danio rerio


Alignment Length:151 Identity:31/151 - (20%)
Similarity:61/151 - (40%) Gaps:24/151 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 EFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKRRLSDDFTALKNLGEKCDRL 119
            |..|| .|:::.:...:.|...|....|::...|.    .|.|:...|..|      |..:..:|
Zfish    21 EILED-EEKLTSIARDSGEKQEMQQSKELMMASNR----SLAEMNLNLQPD------LDHQKIQL 74

  Fly   120 NKKYFKKSDEYAPQHIRE-------------LLQIAASNADGDCDRHVEHFLNGKTDVQTFLNTY 171
            .|:|....:.:....:|.             |||...:..:.:.:...:.||:|...:.:|::.|
Zfish    75 TKRYCCLQELHESYQLRRSTLGSSSLDTLLALLQTEGAKIEEETENMADSFLDGSMPLDSFIDDY 139

  Fly   172 QWSKKISTERKAKEERLGTQL 192
            |..:|::..|:.|.::|...|
Zfish   140 QSKRKLAHLRRVKIDKLQEML 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsp37ANP_001259101.1 Mod_r 42..181 CDD:284587 27/138 (20%)
vps37bbNP_001025385.1 Mod_r 15..149 CDD:284587 27/138 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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