DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsp37A and vps37d

DIOPT Version :9

Sequence 1:NP_001259101.1 Gene:Vsp37A / 31006 FlyBaseID:FBgn0016038 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_005172073.1 Gene:vps37d / 101884856 ZFINID:ZDB-GENE-060526-166 Length:296 Species:Danio rerio


Alignment Length:162 Identity:36/162 - (22%)
Similarity:72/162 - (44%) Gaps:9/162 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NLCTLSLDELKQLDRDPEFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKRRL 102
            |.|     ||::|.:|.:.....:......|.|..:.|:::.....::.::..:..||...|.:|
Zfish    33 NSC-----ELRELLQDEDKMNQIVRLSEKFQELQMDRDTLLVTNRSLAEDSLTRRPHLQNGKLQL 92

  Fly   103 SDDFTALKNLGEKCDRLNKKYFKKSDEYAPQHIRELLQIAASNADGDCDRHVEHFLNGKTDVQTF 167
            :..:..|..|...|.....:....:::::||....|||...:.|:...:..:|.|:.|...::.|
Zfish    93 AAKYEELATLSTACREKQSRLEAFTEKHSPQTAHNLLQEEVTRAEEQSEELLERFMEGHVPLEEF 157

  Fly   168 LNTYQWSKKISTERKAKEERLGTQLSALERAG 199
            |:.:|..:|....|:|:.|:    |..|.|.|
Zfish   158 LDCFQSHRKTYHIRRAQAEK----LQELNRPG 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsp37ANP_001259101.1 Mod_r 42..181 CDD:284587 27/138 (20%)
vps37dXP_005172073.1 Mod_r 32..174 CDD:311259 30/145 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3270
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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