DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13366 and smtnl

DIOPT Version :9

Sequence 1:NP_001036254.1 Gene:CG13366 / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster
Sequence 2:NP_997970.1 Gene:smtnl / 399690 ZFINID:ZDB-GENE-040212-1 Length:493 Species:Danio rerio


Alignment Length:566 Identity:137/566 - (24%)
Similarity:227/566 - (40%) Gaps:140/566 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 ISRLSTLLENARSKIEELEADLSR---GDKTDLSEVLDVARKEKDALEERVAELQDQCSRSQAEL 627
            ::|..|.|.:|   :.|:..|:|.   |.:..|.|.:.|:    ..|...||:||.       |.
Zfish    23 LARYETTLRDA---VREIHVDVSAFKLGIERRLEEAIHVS----GPLGRAVAQLQQ-------EN 73

  Fly   628 RRLRDQLSGLTEECKVVKNNAKCAVSHLEYRLEQLQRDKDKIAGEWQALEERVAELQVQCKCHQE 692
            |:||.||..||.:.:::..:. |..|.|             :.|..|:...         ..||.
Zfish    74 RQLRGQLEALTRQVEMLTGSV-CDRSAL-------------LTGGSQSSNS---------TGHQS 115

  Fly   693 DKAQLQSLLAETQRHLGDVQLKLGEAECRLDQETQLRRKEAEEWQQFQADLLMTVRVANDFKTEA 757
            ..:...|:.|.|           |.|.......|..|         |.:....:|    ..||.:
Zfish   116 PPSAAPSVAALT-----------GSASGSASSPTTTR---------FSSRATFSV----TSKTNS 156

  Fly   758 LSAREQLVLDNKTQKEKIRLLEQQLEK--LTKQQ-----MQQSETPQSVLSTVQREMEMATRRSK 815
            :...|.:.:|...       :.|.||.  |:..:     ::::..|..||......:.||.....
Zfish   157 IERDEPIEVDPAP-------IPQGLENGHLSSTENSIVPLRRNSPPNGVLHEHSAPVPMAMPHLP 214

  Fly   816 LSFSRQDSRLSVKTLIESIENNKAQGKADES--------------------ESHYSSTSSLNSGT 860
            ::.:   ::::..|:::|.|:..:..:|..|                    ||...:.||:.:..
Zfish   215 ITAT---TKVADSTVMKSPESPSSPMQATPSAITDSLTSSPPVTSDNQPQLESPVHAVSSVKTWA 276

  Fly   861 P----DLGTTPIIFPPSSDWHESIRLPVL--QSTNLHVNVGNEVGAGQGTNTSSGSGGDLASTTK 919
            |    .:|:..:....||...:|:....|  .:|:.:|:...::..|:|.....    :|..:  
Zfish   277 PTPARTMGSPRLTEKASSAPAKSVTYSGLFPHNTDRNVDTPGDLSFGRGIERRR----ELVRS-- 335

  Fly   920 ATLP--LRDQQQLAITSTQSQVQNVSQPSTPATPSSAGSSSSGGLPFGNVSKSFISGERKDPLNM 982
            .|||  :..|.:.:|........|.......:.|....|.|     ||..|.|.|          
Zfish   336 QTLPRNIGAQARRSIFERLDSENNSRPKPVDSKPKLKRSQS-----FGVSSASSI---------- 385

  Fly   983 LAKNGGSKRNALLKWCQNKTVGYRNIDITNFSSSWNDGLAFCAILHSYLPDRIPYDQLTPANKRR 1047
                    :..||:||::||:||:||||.||||||:||:||||::||:.|....|:.||||.::.
Zfish   386 --------KQILLEWCRSKTIGYQNIDIQNFSSSWSDGMAFCALVHSFFPTEFDYNGLTPAERKH 442

  Fly  1048 NFSLAFAAAE-SVGIGTTLNINDMCQIER-PDWMQVMSYVTAVYKY 1091
            ||.|||:.|| ..|....:.:.||..:.| ||.|.|.:||.::|.:
Zfish   443 NFELAFSTAEKKAGCDRLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13366NP_001036254.1 Ead_Ea22 554..684 CDD:290646 29/120 (24%)
CH 992..1092 CDD:237981 50/102 (49%)
smtnlNP_997970.1 TolA_bind_tri 51..>90 CDD:292947 16/49 (33%)
CH 386..490 CDD:237981 50/103 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.770

Return to query results.
Submit another query.