DRSC/TRiP Functional Genomics Resources

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Protein Alignment spdi and MICAL-like

DIOPT Version :10

Sequence 1:NP_001036254.1 Gene:spdi / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster
Sequence 2:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster


Alignment Length:104 Identity:41/104 - (39%)
Similarity:61/104 - (58%) Gaps:1/104 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   988 GSKRNALLKWCQNKTVGYRNIDITNFSSSWNDGLAFCAILHSYLPDRIPYDQLTPANKRRNFSLA 1052
            |:...||..||:..|.||..:.:.|.::||.:|||||||:|.:.||.|.:|:|...:...|..||
  Fly    10 GTGTKALEYWCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLIDFDRLKADDIYENNDLA 74

  Fly  1053 FAAAES-VGIGTTLNINDMCQIERPDWMQVMSYVTAVYK 1090
            |..||. :||...|:..||...|.||.:.:::|::..||
  Fly    75 FTTAEKYLGIPALLDAADMVSYEVPDRLSILTYLSQFYK 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spdiNP_001036254.1 SMC_prok_B <257..>845 CDD:274008
Smc <501..>794 CDD:440809
CH_CYTS 982..1093 CDD:409048 41/104 (39%)
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 40/103 (39%)
LIM_like_1 146..207 CDD:188784
PTZ00449 <411..727 CDD:185628
bMERB_dom 785..933 CDD:463467
Blue background indicates that the domain is not in the aligned region.

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