DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13366 and Smtnl1

DIOPT Version :9

Sequence 1:NP_001036254.1 Gene:CG13366 / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster
Sequence 2:NP_001178668.1 Gene:Smtnl1 / 311167 RGDID:1311701 Length:470 Species:Rattus norvegicus


Alignment Length:535 Identity:129/535 - (24%)
Similarity:213/535 - (39%) Gaps:102/535 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   580 IEELEADLSRGDKTDLSEVLDVARKEKDALEERVAE-LQDQCSRSQAELRRLRDQLSGLTEECKV 643
            :|:.|.:.|....|......::|........|.||| ..::.:..........:...|....||.
  Rat     1 MEQTEGNPSEDGTTVSPTAGNLATPGSQGTAEEVAEGTAEEVAEGTVGTNDKEEPPDGAEHLCKA 65

  Fly   644 VKNNAKCAVSHLEYR-LEQLQRDKDKIAGEWQALEERVAELQVQCKCHQEDKAQLQSLLAETQRH 707
            ...........:|.. ||:|:.|..   ||.:..||..|:|       .|:|...:.....:|..
  Rat    66 ASEGGISGGCQVEASILEELKTDSQ---GEARGKEEAKADL-------AEEKGGKEDTTVSSQED 120

  Fly   708 LGDVQLKLGEAECRLDQETQLRRKEAEEWQQFQADLLMTVRVANDFKTEALSAREQLVLDNKTQK 772
            .|.            .:||   :.|..|..:.:..:|...:...|.|...|.::|:..:::|.:.
  Rat   121 TGK------------KEET---KPEPSEVTEKEEAVLPLEKQKVDEKETNLESKEKSDVNDKAEP 170

  Fly   773 E-------KIRLLEQQLEKLTKQQMQQSETPQSVLSTVQREMEMATRRSKLSFSRQDSRLSVKTL 830
            |       ::.:.|.:.|...|..::....||  |..|               ..:::|...|.|
  Rat   171 ESKEDAGAEVTVKEAETESQKKADVKDQAEPQ--LQEV---------------DGKEARSDTKEL 218

  Fly   831 IE---SIENNKAQGKADESESHYSSTSSLNSGTPDLGTTPIIFPPS-SDWHESIRLPVLQSTNLH 891
            :|   ..|..:.|||.:|||...:                 :.|.| .||.||   |..:.|:|.
  Rat   219 VEPGSPTEEQEEQGKENESEERAA-----------------VIPSSPEDWPES---PTDEGTSLS 263

  Fly   892 VN-VGNEVGAGQGTNTSSGSGGDLASTTKATLPLRDQQQLAITSTQSQVQNVSQPSTPATPSSA- 954
            .: :|.|..|...|:.|:............|.||..:::    ..::..:.||.|:.|..|.:. 
  Rat   264 PDGLGPESTASGETSASASESSPSEVPESPTEPLPSEKK----KERAPERRVSAPTRPRGPRAQN 324

  Fly   955 --------GSSSSGGLPFGNVSKSFISGERKDPLNMLAKNGGSKRNALLKWCQNKTVGYRNIDIT 1011
                    |.::||  |......:..:|         |..||.| |.||:||:..|..|.::||.
  Rat   325 RKAIMDKFGGAASG--PTALFRNTKAAG---------AAIGGVK-NMLLEWCRAMTRNYEHVDIQ 377

  Fly  1012 NFSSSWNDGLAFCAILHSYLPDRIPYDQLTPANKRRNFSLAFAAAESVG-IGTTLNINDMCQIER 1075
            ||||||:.|:||||::|.:.||...|.:|.|..:|.||:|||:.||.:. ....|.::||.::..
  Rat   378 NFSSSWSSGMAFCALIHKFFPDAFDYAELDPTKRRHNFTLAFSTAEKLADCAQLLEVDDMVRLAV 442

  Fly  1076 PDWMQVMSYVTAVYK 1090
            ||...|.:|:..:|:
  Rat   443 PDSKCVYTYIQELYR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13366NP_001036254.1 Ead_Ea22 554..684 CDD:290646 22/105 (21%)
CH 992..1092 CDD:237981 42/100 (42%)
Smtnl1NP_001178668.1 CH 357..457 CDD:237981 42/100 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.770

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