DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13366 and Smtn

DIOPT Version :9

Sequence 1:NP_001036254.1 Gene:CG13366 / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster
Sequence 2:XP_006514787.1 Gene:Smtn / 29856 MGIID:1354727 Length:954 Species:Mus musculus


Alignment Length:1141 Identity:228/1141 - (19%)
Similarity:394/1141 - (34%) Gaps:318/1141 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KQQQNSSNNNRQKSQSSTSLNTAHEQQQQHSITAATTKFYAHQETASYERGVDVGDEGALLLTNQ 89
            :::..:|...|.:.|.:.. |..|.||::....||..:.....|:.:     ||.:...||.:..
Mouse    45 EEEALASKRFRAERQDNKE-NWLHSQQREAEQQAALARLAGRLESMN-----DVEELTTLLRSAG 103

  Fly    90 QQEQRRQQQQLLQQPQSNTLPQKKSKLKGQKQPKLLPVQQPHSNA-------------PEPHDPQ 141
            :.|:|:..:..:::.::..:  |.:.|.|:...: ||...|..::             |||...:
Mouse   104 EYEERKLIRAAIRRVRAQEI--KAATLAGRLCSR-LPSSGPREDSRRQAAHTLDPGKVPEPEQQE 165

  Fly   142 QPLMTSLAAVPQASATGSSSNSNINNNNALAALQDGGAAAAAAADFYQQLAAAATATATATSANG 206
            |.     ..|.:.:.|...::.::.....|.....||..::.|:.  .....:|:.......|..
Mouse   166 QQ-----TEVLEPTPTPEDTSQDVTTVTLLLRAPPGGRPSSPASP--HNSPTSASPEPLLEPAGA 223

  Fly   207 SNTSADSPVSSFP------AAAAAVAVAAVAASSYQQQQQQQQLLNNEQQQQQLLE-----ANNK 260
            ...:.::||||.|      |.:....::.|.:||  :.:...:.|....:....|:     :|.|
Mouse   224 QCPAVEAPVSSEPLPHPSEAPSPEPPMSPVPSSS--RGRVISKPLPGPTEPSDTLDSIRGFSNTK 286

  Fly   261 MQELHKQMERFRSEQMQLETRITELLPYQSEVAKLKGDLVKMQSLQEKSQM-EIGNLKYENESLR 324
            ..:        .||....:..::.|.|.|....:      :..||...||. .:|:         
Mouse   287 RAD--------PSETKSCQRSLSVLSPRQPTPNR------EPTSLAGPSQFRRVGS--------- 328

  Fly   325 NRLRDVVNSPLSDAEKHQIIQDS-QRLHSSAPASIALPSTHDAHDGTPCL---TPDWDKQSSSSE 385
              :||.|....||:.....:||. .|...::|....||.        |.|   ||.....|:||.
Mouse   329 --VRDRVQKFTSDSPVVARLQDGPPRTALASPTPTRLPG--------PSLISTTPASSSSSNSSS 383

  Fly   386 ISVACLQDKIIQMEETHYSTNEELQATLQE---------LADLQTQLTDTQTENERLAEEKDVLF 441
            .|.:.......|.|..|  :..|||:..||         |..|:.:....:..:|..:....|..
Mouse   384 PSPSDTSSHKKQRELAH--SLAELQSCPQEEGPGGRGLALRSLENRAGGPKPCSEEPSTPPPVAV 446

  Fly   442 -------QSLCRQTEKLNESRTQISTLQELLLRDTKQPAPEVSASEREQKLLDLIKTSQEEREAV 499
                   ......|.::.:.|.|.||.:.||  .|.....|::...|...  .|:.||...:..:
Mouse   447 GTGEPGGSMKTTFTIEIKDGRGQASTGRVLL--PTGNQRAELTLGLRAPP--TLLSTSSGGKNTI 507

  Fly   500 LLKQE-----ELGAEL---------------AEMKQAREAGQLELQRQRERIALLDSQLDAANAE 544
            .....     .||:..               ...|.|.:||.....             ..|.:.
Mouse   508 THISNPGTVTRLGSVTHVTTFSHASPGNRGGCNFKAAEDAGTPVAH-------------PPAFST 559

  Fly   545 RRQ---GEAQFSQAMEEISQRAIEISRLSTLLENARSKIEELEADLSRGDKTDLSEVLDVARKEK 606
            ||.   |.::.|..||......     .||.:| |.:..|:...|.....::.||      .:|.
Mouse   560 RRSSSGGPSRRSSLMEPDPAEP-----PSTTVE-AANGAEQARVDKGPEGRSPLS------AEEL 612

  Fly   607 DALEERVAELQDQCSRSQAELRRLRDQLSGLTEECKVVKNNAKCAVSHLEYRLEQLQRDKDKIAG 671
            .|:|:            :..|.::.||.:.. ||.|:::...:        .|.|.:||      
Mouse   613 TAIED------------EGVLDKMLDQTTNF-EERKLIRAALR--------ELRQRKRD------ 650

  Fly   672 EWQALEERVAELQVQCKCHQEDKAQLQSLLAETQRHLGDVQLKLGEAECRLDQETQLRRKEAEEW 736
                               |.||        |.:|.|.:.:.:.||:...:..||..|..:    
Mouse   651 -------------------QRDK--------ERERRLREARARPGESRSNVATETTTRHSQ---- 684

  Fly   737 QQFQADLLMTVRVANDFKTEALSAREQLVLDNK-TQKEKIRLLEQQLEKLTKQQMQQSETPQSVL 800
                       |.|:......::..|:||..|. ||..:...:|....:..:.....|.|..:.:
Mouse   685 -----------RAADGSTVGTVTKTERLVHSNDGTQTARTTTVESSFMRRLENGSSSSSTTTTTV 738

  Fly   801 STVQREMEMATRRSKLS---FSRQDSRLSVKTLIESIENNKAQGKADESESHYSSTSSLNSGTPD 862
            .|.......::..||..   |.|:|...|....:.::|..:|:.|                    
Mouse   739 QTKSFSSSSSSSSSKKMGSIFDREDQTSSRPGSLAALERRQAEKK-------------------- 783

  Fly   863 LGTTPIIFPPSSDWHESIRLPVLQSTNLHVNVGNEVGAGQGTNTSSGSGGDLASTTKATLPLRDQ 927
                                             .|:...|....:|.|                |
Mouse   784 ---------------------------------KELMKAQSLPKTSAS----------------Q 799

  Fly   928 QQLAITSTQSQVQNVSQPSTPATPSSAGSSSSGGLPFGNVSKSFISGERKDPLNMLAKNGGSKRN 992
            .:.|:.....:..:...|.||.|  :...|:|.|:|                      |..|.:.
Mouse   800 ARKAMIEKLEKEGSAGGPGTPRT--AVQRSTSFGVP----------------------NANSIKQ 840

  Fly   993 ALLKWCQNKTVGYRNIDITNFSSSWNDGLAFCAILHSYLPDRIPYDQLTPANKRRNFSLAFAAAE 1057
            .||.||:.||.||.::||.||||||:||:||||::|::.|:...|.||:|.|:|:||.:||::||
Mouse   841 MLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEMAFSSAE 905

  Fly  1058 S-VGIGTTLNINDMCQI-ERPDWMQVMSYVTAVYKY 1091
            . |.....:.:.||..: ::||...|.:||.::|.:
Mouse   906 MLVDCVPLVEVEDMMIMGKKPDPKCVFTYVQSLYNH 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13366NP_001036254.1 Ead_Ea22 554..684 CDD:290646 23/129 (18%)
CH 992..1092 CDD:237981 45/102 (44%)
SmtnXP_006514787.1 Smoothelin 1..34 CDD:372157
Smoothelin 73..122 CDD:372157 9/53 (17%)
PHA03247 <107..454 CDD:223021 73/393 (19%)
Smoothelin 601..648 CDD:372157 13/73 (18%)
CH 839..943 CDD:237981 45/103 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.770

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