DRSC/TRiP Functional Genomics Resources

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Protein Alignment spdi and Smtnl2

DIOPT Version :10

Sequence 1:NP_001036254.1 Gene:spdi / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster
Sequence 2:NP_808444.1 Gene:Smtnl2 / 276829 MGIID:2442764 Length:456 Species:Mus musculus


Alignment Length:574 Identity:133/574 - (23%)
Similarity:203/574 - (35%) Gaps:187/574 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 ISRLSTLLENARSKIEELEADLSRGDKTDLSEVLDVARKEKDALEERVAELQDQCSRSQAELRRL 630
            :.|....||.|...:.|....|.||.:..::|.|.:|    ..|...|||||....|.||:|.||
Mouse    17 LGRYEAALEGAVRALHEDMQGLQRGVERRVAEALRLA----GPLARTVAELQRDNQRLQAQLERL 77

  Fly   631 RDQLSGL-------------------TEECKVVKNNAKCAVSHLEYRLEQLQRDKDKIAGEWQAL 676
            ..|:..|                   |...:..:.......||..:.|          :|...::
Mouse    78 TRQVEALGLATGVSPAPGTPSPPPAATVTDRAPRLGTARFSSHATFSL----------SGRSPSV 132

  Fly   677 EERVAELQVQCKCHQEDKAQLQSLLAETQRHLGDVQLKLGEAECRLDQETQLRRKEAEEWQQFQA 741
            |            |.|               ..|::::.....|.|:...||....|....:.|.
Mouse   133 E------------HDE---------------ASDLEVRRASNSCILENGHQLDAGPANGSSEVQT 170

  Fly   742 DLLMTVRVANDFKTEALSAREQLVLDNKTQKEKIRLLEQQLEKLTKQQMQQSETPQSVLSTVQRE 806
                                                          ...|:...|:.|..:::..
Mouse   171 ----------------------------------------------SSAQEPPRPRPVSLSLRMP 189

  Fly   807 MEMATRRSKLSFSRQDSRLSVKTLIESIENNKAQGKADESESHYSSTSSLNSGTPDLGTTPIIFP 871
            .:..|..:::|                   .|..|  :.|.|..|.||:...|    |.||....
Mouse   190 HQPVTAVTRVS-------------------EKFSG--ETSASALSPTSAAIVG----GFTPSPSE 229

  Fly   872 PSSDWHESIRLPVLQSTNLHVNVGNEVGAGQGTNTSSGSGGDLASTTKATLPLRDQQQLAITSTQ 936
            ..|.|..|   |..:|::.             |.:.||||....:..|.    :|...| :|..|
Mouse   230 AISPWTPS---PTEKSSSF-------------TRSLSGSGYGAVTAGKR----KDSPPL-VTPPQ 273

  Fly   937 SQVQNVSQPSTPA-------------------TPSSAGSSSSGGL----PFGNVSKSFISGERKD 978
            |...  |||  ||                   .|.::|:.:...|    .....||.  .||.:.
Mouse   274 SPPS--SQP--PAMTQAPRQGERRRELVRSQTLPRTSGAQARKALFEKWEQDTASKG--KGETRA 332

  Fly   979 PLNMLAKNG----GSKRNALLKWCQNKTVGYRNIDITNFSSSWNDGLAFCAILHSYLPDRIPYDQ 1039
            .|......|    .|.:..||:||::|||||:::|:.||||||:||:||||::||:.||...|:.
Mouse   333 KLKRSQSFGVASASSIKQILLEWCRSKTVGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNA 397

  Fly  1040 LTPANKRRNFSLAFAAAESV-GIGTTLNINDMCQIER-PDWMQVMSYVTAVYKY 1091
            |:|..:::||.|||..||:: .....:.:.||..:.| ||.|.|.:||.::|.:
Mouse   398 LSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spdiNP_001036254.1 SMC_prok_B <257..>845 CDD:274008 47/297 (16%)
Smc <501..>794 CDD:440809 41/246 (17%)
CH_CYTS 982..1093 CDD:409048 48/116 (41%)
Smtnl2NP_808444.1 PRK09039 <8..>84 CDD:181619 24/70 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..140 6/56 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..190 7/81 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..310 27/118 (23%)
CH_SMTNL2 347..453 CDD:409110 47/105 (45%)

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