DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13366 and smtna

DIOPT Version :9

Sequence 1:NP_001036254.1 Gene:CG13366 / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster
Sequence 2:XP_003199343.1 Gene:smtna / 100333230 ZFINID:ZDB-GENE-091204-245 Length:271 Species:Danio rerio


Alignment Length:208 Identity:67/208 - (32%)
Similarity:98/208 - (47%) Gaps:40/208 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   900 AGQGTNTSSGSGGDLASTTKATLPLRDQQ-------------QLAITSTQSQVQNVSQPSTPATP 951
            |.:..|...|:||    .|.|:|. :||:             :.|...|.||..:||.|.|.::|
Zfish    72 AARMENLRQGTGG----KTSASLS-KDQKASNGPGGAQFNAHRTAQAKTLSQPTSVSSPKTVSSP 131

  Fly   952 SS---AGSSSSGGLPFGNVSKSFISGERKDPLNMLAKNGGSKRNALLKWCQNKTVGYRNIDITNF 1013
            :.   |....|||...|..:       .||...|           ||.||:.||..|..::|.||
Zfish   132 AQSHVARVKMSGGSAVGGPN-------TKDVKQM-----------LLDWCRVKTEPYEGVNIQNF 178

  Fly  1014 SSSWNDGLAFCAILHSYLPDRIPYDQLTPANKRRNFSLAFAAAESVG-IGTTLNINDMCQIERPD 1077
            ||||.|||||||::|.:.|:...|..|.|.:::.||..||..||.:. ....|:::|:.::..||
Zfish   179 SSSWADGLAFCALVHRFFPEGFEYCTLNPYDRKSNFEKAFKTAERLADCPPLLDVDDLMRMREPD 243

  Fly  1078 WMQVMSYVTAVYK 1090
            |..|.:|:...|:
Zfish   244 WKCVYTYIQEFYR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13366NP_001036254.1 Ead_Ea22 554..684 CDD:290646
CH 992..1092 CDD:237981 40/100 (40%)
smtnaXP_003199343.1 Smoothelin 20..59 CDD:315226
CH 153..256 CDD:306753 42/113 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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