DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and HAT2

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_199548.1 Gene:HAT2 / 834784 AraportID:AT5G47370 Length:283 Species:Arabidopsis thaliana


Alignment Length:93 Identity:19/93 - (20%)
Similarity:40/93 - (43%) Gaps:20/93 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 TALENEIEIIDRKPSECNSKGVISYGHVVSKLFWQNDEFLLKISTFTTAIVSHIIPCILFPIITI 242
            |.:..::::.::|||:.||....|           .:|...|.:|..:......:|    |..:.
plant   445 TPVTPKVQVQNKKPSKANSTDSSS-----------EEEGKSKQTTGKSPAAKATVP----PKKSP 494

  Fly   243 ILINELRRIDVKRKSSTSSNKAKDSQNR 270
            :.:|:     .|..||:||:.:.|.:.:
plant   495 VAVNK-----AKASSSSSSDSSSDDEKQ 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649
HAT2NP_199548.1 HD-ZIP_N 8..91 CDD:461370
HOX 129..183 CDD:197696
HALZ 185..228 CDD:128634
Blue background indicates that the domain is not in the aligned region.

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