Protein Alignment vnd and HAT1

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_193476.1
• Gene: HAT1 / 827457
• AraportID: AT4G17460
• Length: 282
• Species: Arabidopsis thaliana
• Alignment Length: 250
• Identity: 63/250 - (25%)
• Similarity: 97/250 - (38%)
• Gaps: 55/250 - (22%)

  Fly   418 PVTSEVSYTYIGSNCQTSPALSGDYK-SYSRSADSDALSVGDALHTLHG-SSGNGSAGGAPTAHA 480
            |.:|.:|...:....||..:.|...| .:.|..|.::|.....|....| ||.|.:.
plant    28 PTSSPMSNLQMFPWNQTLVSSSDQQKQQFLRKIDVNSLPTTVDLEEETGVSSPNSTI-------- 84

  Fly   481 LHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDID-DVDDADGSGGGDANGSDGLPNK 544
                 ::|.:....|.:.||.:|.|.|           :|:| .:|.:...|..|.....|....
plant    85 -----SSTVSGKRRSTEREGTSGGGCG-----------DDLDITLDRSSSRGTSDEEEDYGGETC 133

  Fly   545 KRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQN---- 605
            ::|.|:  :|.|:..||..|::...|:..::..||..:.||..||::||||.|.:||..|.
plant   134 RKKLRL--SKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDC 196

  Fly   606 -------EKGYEGHPGL---------------LHGHATHPHHPSALPSPRRVAVP 638
                   ||..|.:..|               |:|..:.|......||..|||.|
plant   197 EYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMCPSCERVAGP 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	20/55 (36%)
HAT1	NP_193476.1	HD-ZIP_N	8..98	CDD:461370	17/82 (21%)
		HOX	134..188	CDD:197696	19/55 (35%)
		HALZ	190..233	CDD:128634	7/42 (17%)