Protein Alignment vnd and HB20

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_186771.1
• Gene: HB20 / 821232
• AraportID: AT3G01220
• Length: 286
• Species: Arabidopsis thaliana
• Alignment Length: 196
• Identity: 49/196 - (25%)
• Similarity: 74/196 - (37%)
• Gaps: 38/196 - (19%)

  Fly   457 GDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDI 521
            |.....||..:........| .| |.|...|...|.:.||.     .....|:.:|:|:.:.:|
plant    22 GFMFQQLHEDNSQDQLPSCP-PH-LFNGGGNYMMNRSMSLM-----NVQEDHNQTLDEENLSDD- 78

  Fly   522 DDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPERE-HLASLIRLT 585
                           |:..:..:|:||..|   .|...||:.|.....|. |||: .||..:.:.
plant    79 ---------------GAHTMLGEKKKRLQL---EQVKALEKSFELGNKLE-PERKIQLAKALGMQ 124

  Fly   586 PTQVKIWFQNHRYKTKRAQNEKGYEG----HPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKP 646
            |.|:.|||||.|.:.|..|.|:.|:.    ...|...:|      |.|...:::...|:....|.
plant   125 PRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNA------SLLAYNKKLLAEVMALKNKE 183

  Fly   647 C 647
            |
plant   184 C 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	21/56 (38%)
HB20	NP_186771.1	Homeodomain	87..140	CDD:459649	22/56 (39%)
		HALZ	142..183	CDD:460477	8/46 (17%)