Protein Alignment vnd and HB-1

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_186796.1
• Gene: HB-1 / 821138
• AraportID: AT3G01470
• Length: 272
• Species: Arabidopsis thaliana
• Alignment Length: 291
• Identity: 62/291 - (21%)
• Similarity: 98/291 - (33%)
• Gaps: 81/291 - (27%)

  Fly   480 ALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNED--GIEEDIDDVDDADGSGGGDANGSDGLP 542
            |.|.|:.....|.|..::..|.....:..:.|....  ...||:.|.|..|          |.||
plant    12 ASHGNSMFFLGNLNPVVQGGGARSMMNMEETSKRRPFFSSPEDLYDDDFYD----------DQLP 66

  Fly   543 NKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEK 607
            .|||:    .|..|.:.||:.|..:..|....:..||..:.|.|.||.:||||.|.:.|..|.|:
plant    67 EKKRR----LTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

  Fly   608 GYE----GHPGLLHGH---------------------------ATHPHHPSALPSPRRVAVPVLV 641
            .|:    .:..||..:                           |..|  |..:|.|.::. ||.:
plant   128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEP--PGQVPEPNQLD-PVYI 189

  Fly   642 ---------RNGKPCLG------DSSKLGADCVSVSSATATAMQNAAAHHLVALNGAAAYQHAAA 691
                     |.....:|      |:.:|...|.|...:......|         :.|:.:.:..:
plant   190 NAAAIKTEDRLSSGSVGSAVLDDDAPQLLDSCDSYFPSIVPIQDN---------SNASDHDNDRS 245

  Fly   692 AAAGLHAHAHAHAHAHGHGHPHAHAQRAAWW 722
            ..|.:.....:.:|.|       |.:..|:|
plant   246 CFADVFVPTTSPSHDH-------HGESLAFW 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	18/55 (33%)
HB-1	NP_186796.1	Homeodomain	68..121	CDD:459649	20/56 (36%)
		HALZ	123..164	CDD:460477	5/40 (13%)