Protein Alignment vnd and HB4

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_182018.1
• Gene: HB4 / 819100
• AraportID: AT2G44910
• Length: 318
• Species: Arabidopsis thaliana
• Alignment Length: 323
• Identity: 62/323 - (19%)
• Similarity: 101/323 - (31%)
• Gaps: 133/323 - (41%)

  Fly   428 IGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNN 492
            :|::.|..|:|..:....:.|:.|.:..                       | :||.|||:....
plant    14 LGNSQQKEPSLRLNLMPLTTSSSSSSFQ-----------------------H-MHNQNNNSHPQK 54

  Fly   493 NHSL------KAEGI------------------------------------------NGA----- 504
            .|::      ::.||                                          |.|
plant    55 IHNISWTHLFQSSGIKRTTAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLS 119

  Fly   505 GSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRY 569
            |:..|.::...|.|.:.:....:.|.|.|.::..||......::::..:|.|...||..|::...
plant   120 GNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHST 184

  Fly   570 LSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYE------------------------ 610
            |:..::..||..:.|...||::||||.|.:||..|.|...|
plant   185 LNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELR 249

  Fly   611 -----GHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSSATATA 668
                 .|   |:.|.|.|...:..||..|                        ||.|:||.||
plant   250 ALKLSPH---LYMHMTPPTTLTMCPSCER------------------------VSSSAATVTA 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	17/55 (31%)
HB4	NP_182018.1	HD-ZIP_N	8..124	CDD:461370	18/133 (14%)
		Homeodomain	162..216	CDD:459649	16/53 (30%)
		HALZ	218..261	CDD:128634	5/45 (11%)